3TJA

crystal structure of helicobacter pylori uree in the apo form

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 78
  • Norm. En. per Res.: -4.4335
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-23.6614	8.0425	-330.195	-345.814	78	11	19	11973	0	11	16
A-C	-13.211	-46.7732	-235.66	-295.6443	107	8	4	10383	2	35	49
C-D	-24.7126	9.1119	-321.797	-337.3977	81	8	20	11790	0	13	15

Interface residues

• A-B: ALA103A, ALA103B, ALA104A, ALA104B, ALA85A, ALA85B, ALA89A, ALA89B, ALA92A, ALA92B, ARG101A, ARG101B, ARG145A, ARG145B, ASN100A, ASN100B, CYS95A, CYS95B, GLN111A, GLN111B, GLU113A, GLU113B, GLU90A, GLU90B, GLU97A, GLU97B, GLY130A, GLY99A, GLY99B, HIS102A, HIS102B, ILE94A, ILE94B, ILE98A, ILE98B, LEU105A, LEU105B, LEU125A, LEU125B, LEU129A, LEU129B, LEU146A, LEU146B, LEU55A, LEU55B, LYS128A, LYS128B, LYS54B, LYS93A, LYS93B, MET150B, PHE112A, PHE112B, PHE114A, PHE114B, PRO117B, SER110A, SER110B, SER149A, SER149B, SER87A, SER87B, THR116A, THR116B, THR147A, THR147B, TYR106A, TYR106B, TYR107A, TYR107B, TYR96A, TYR96B, VAL148A, VAL148B, VAL88A, VAL88B, VAL91A, VAL91B
• A-C: ALA124A, ALA124C, ALA72A, ALA72C, ARG11A, ARG11C, ARG134A, ARG134C, ARG40A, ARG40C, ASN133A, ASN133C, ASN14A, ASN14C, ASN74A, ASN74C, ASN9A, ASP12C, ASP17A, ASP17C, ASP21A, ASP21C, ASP24A, ASP24C, ASP77A, ASP77C, GLN41A, GLN41C, GLN59A, GLN59C, GLU119A, GLU119C, GLU127A, GLU127C, GLU26A, GLU26C, GLU29A, GLU29C, GLU69A, GLU79A, GLU79C, GLY60A, GLY60C, ILE70A, ILE70C, ILE75A, ILE75C, ILE81A, ILE81C, LEU10A, LEU10C, LEU123A, LEU123C, LEU125A, LEU125C, LEU126C, LEU136A, LEU136C, LEU13A, LEU13C, LEU16A, LEU16C, LEU25A, LEU25C, LEU76A, LEU76C, LYS120A, LYS120C, LYS139A, LYS139C, LYS38A, LYS38C, LYS68A, LYS68C, PHE118A, PHE118C, PHE18A, PHE18C, PHE28A, PHE28C, PRO121A, PRO121C, PRO15A, PRO15C, SER137A, SER137C, SER138A, SER138C, SER19A, SER19C, SER78A, SER78C, THR122A, THR122C, TRP27A, TRP27C, TYR22A, TYR22C, VAL135A, VAL135C, VAL20A, VAL20C, VAL23A, VAL73A, VAL73C, VAL80A, VAL80C
• C-D: ALA103C, ALA103D, ALA104C, ALA104D, ALA85C, ALA85D, ALA89C, ALA89D, ALA92C, ALA92D, ARG101C, ARG101D, ARG145C, ARG145D, ARG31D, ASN100C, ASN100D, CYS95C, CYS95D, GLN111C, GLN111D, GLU113C, GLU113D, GLU144D, GLU90C, GLU90D, GLU97C, GLU97D, GLY130C, GLY99C, GLY99D, HIS102C, HIS102D, ILE94C, ILE94D, ILE98C, ILE98D, LEU105C, LEU105D, LEU125C, LEU125D, LEU129C, LEU129D, LEU146C, LEU146D, LEU55D, LYS128C, LYS128D, LYS143D, LYS54D, LYS86C, LYS86D, LYS93C, LYS93D, MET150D, PHE112C, PHE112D, PHE114C, PHE114D, PRO117C, SER110C, SER110D, SER149D, SER87C, SER87D, THR116C, THR116D, THR147C, THR147D, TYR106C, TYR106D, TYR107C, TYR107D, TYR96C, TYR96D, VAL148C, VAL148D, VAL88C, VAL88D, VAL91C, VAL91D