3T6Q

crystal structure of mouse rp105/md-1 complex

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 104
  • Norm. En. per Res.: -4.0202
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-C	-114.8219	-41.4878	-261.787	-418.0967	104	15	1	9932	3	32	27
A-B	0.0	-4.473	-53.2404	-57.7134	59	0	4	2385	1	12	22
A-D	-18.1695	-34.9907	-149.51	-202.6702	64	3	3	5591	1	13	11
C-B	-11.519	-29.2591	-153.464	-194.2421	65	2	3	5720	2	13	11
B-D	-87.9854	-39.0016	-259.369	-386.3559	103	12	1	9873	2	33	27

Interface residues

• A-C: ALA110A, ALA123C, ALA307A, ALA330A, ARG114C, ARG115C, ARG75C, ARG79C, ARG86A, ASN111A, ASN127C, ASN159A, ASN182A, ASN205A, ASN207A, ASN228A, ASN280A, ASN38A, ASN41A, ASN63A, ASN65C, ASN67C, ASP105C, ASP179A, ASP257A, ASP304A, ASP376A, ASP77C, ASP83A, CYS102C, CYS112C, GLN106C, GLN119C, GLN134A, GLN181A, GLN233A, GLN282A, GLN49C, GLN76C, GLU103C, GLU104C, GLU118C, GLU256A, GLU40A, GLU59A, GLY113C, GLY117C, GLY124C, GLY157A, GLY208A, GLY230A, GLY231A, GLY253A, GLY354A, HIS129A, HIS309A, HIS379A, ILE120C, ILE133A, ILE72C, ILE73C, ILE78C, LEU101C, LEU48C, LEU74C, LEU84A, LYS108C, LYS116C, LYS283A, LYS353A, MET258A, PHE109C, PHE111C, PHE131A, PHE132A, PHE255A, PHE60A, PHE62A, PHE81A, PRO100C, PRO107C, PRO125C, SER110C, SER153A, SER158A, SER329A, SER351A, SER61A, THR105A, THR109A, THR135A, THR254A, THR306A, THR356A, THR85A, TRP251A, TYR121C, TYR122C, TYR155A, TYR99C, VAL107A, VAL126C, VAL177A, VAL327A
• A-B: ALA184A, ALA184B, ALA212A, ALA212B, ARG86A, ARG86B, ASN159A, ASN159B, ASN182A, ASN182B, ASN183A, ASN183B, ASN209A, ASN209B, ASN234A, ASP210A, ASP210B, ASP259A, GLN134A, GLN134B, GLN233A, GLN233B, GLN88A, GLN88B, GLY136A, GLY136B, GLY213A, GLY213B, HIS160A, HIS160B, HIS186A, HIS186B, ILE114A, ILE114B, ILE137A, ILE137B, ILE161A, ILE161B, ILE185A, ILE185B, ILE211A, ILE211B, LYS165B, PRO112A, PRO112B, PRO66B, SER138A, SER138B, SER158A, SER158B, SER162A, SER162B, THR135A, THR135B, TYR187A, TYR187B, TYR90A, TYR90B, VAL64B
• A-D: ALA117A, ALA120A, ALA123D, ALA32D, ARG114D, ARG69D, ASN111A, ASN34D, ASN67D, ASP141A, ASP50D, ASP56D, CYS33D, GLN119D, GLN49D, GLN69A, GLU118A, GLU118D, GLU94A, GLY124D, GLY136A, GLY52D, GLY71D, HIS146A, HIS160A, HIS30D, HIS93A, ILE114A, ILE120D, ILE137A, ILE140A, ILE143A, ILE55D, ILE68D, ILE72D, ILE73D, ILE89A, ILE92A, LEU113A, LEU53D, LYS168A, LYS29D, MET116A, PHE115A, PHE142A, PHE51D, PHE70D, PRO112A, PRO144A, PRO28D, SER138A, SER139A, SER54D, THR119A, THR135A, THR31D, THR67A, TRP27D, TRP91A, TYR121D, TYR122D, TYR42D, TYR90A, VAL41D
• C-B: ALA117B, ALA120B, ALA123C, ALA32C, ARG114C, ARG69C, ASN111B, ASN34C, ASN70B, ASP141B, ASP50C, ASP56C, CYS33C, GLN119C, GLN49C, GLN69B, GLU118B, GLU118C, GLU94B, GLY124C, GLY136B, GLY52C, GLY71C, HIS146B, HIS160B, HIS30C, HIS93B, ILE114B, ILE120C, ILE137B, ILE140B, ILE143B, ILE55C, ILE68B, ILE68C, ILE72C, ILE73C, ILE89B, ILE92B, LEU113B, LEU53C, LEU74C, LYS29C, MET116B, PHE115B, PHE142B, PHE51C, PHE70C, PRO112B, PRO144B, PRO28C, SER138B, SER139B, SER54C, THR119B, THR135B, THR31C, THR67B, TRP27C, TRP91B, TYR121C, TYR122C, TYR42C, TYR90B, VAL41C
• B-D: ALA110B, ALA123D, ALA307B, ALA330B, ARG114D, ARG115D, ARG75D, ARG79D, ARG86B, ASN111B, ASN127D, ASN159B, ASN182B, ASN205B, ASN207B, ASN228B, ASN280B, ASN331B, ASN38B, ASN41B, ASN63B, ASN65D, ASP105D, ASP179B, ASP257B, ASP259B, ASP304B, ASP376B, ASP77D, ASP83B, CYS112D, GLN106D, GLN119D, GLN134B, GLN181B, GLN233B, GLN282B, GLN49D, GLN76D, GLN88B, GLU103D, GLU104D, GLU118D, GLU256B, GLU40B, GLU59B, GLY113D, GLY117D, GLY124D, GLY157B, GLY208B, GLY230B, GLY231B, GLY253B, GLY354B, HIS309B, HIS379B, ILE120D, ILE133B, ILE72D, ILE73D, ILE78D, LEU101D, LEU48D, LEU74D, LEU84B, LYS108D, LYS116D, LYS283B, LYS353B, MET258B, PHE109D, PHE111D, PHE131B, PHE132B, PHE255B, PHE60B, PHE62B, PHE81B, PRO100D, PRO107D, PRO125D, SER110D, SER153B, SER158B, SER329B, SER61B, THR105B, THR109B, THR135B, THR254B, THR306B, THR356B, THR85B, TRP251B, TYR121D, TYR122D, TYR155B, TYR99D, VAL107B, VAL126D, VAL177B, VAL327B