3SIY

crystal structure of a duf1989 family protein (tm1040_0329) from silicibacter sp. tm1040 at 1.35 a resolution

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 152
  • Norm. En. per Res.: -4.0756
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-114.9688	-12.2819	-492.236	-619.4868	152	21	5	17861	6	69	62
A-C	-26.115	-2.4978	-37.4493	-66.0621	46	4	0	1855	2	19	21
A-D	0.0	0.0	-0.4037	-0.4037	12	0	0	91	0	8	7
B-C	0.0	0.0	-0.0031	-0.0031	2	0	0	4	0	0	2
B-D	-11.9336	-20.9988	-34.6905	-67.6228	19	1	0	1238	4	10	9
C-D	-118.8265	-12.1897	-480.707	-611.7232	152	22	5	17834	6	69	58

Interface residues

• A-B: ALA10A, ALA10B, ALA124A, ALA124B, ALA132A, ALA132B, ALA178A, ALA178B, ARG103A, ARG103B, ARG104A, ARG104B, ARG105A, ARG105B, ARG12A, ARG12B, ARG130A, ARG130B, ARG148A, ARG148B, ARG6A, ARG6B, ARG85A, ARG85B, ARG89A, ARG89B, ARG90A, ARG90B, ARG94A, ARG94B, ASN102A, ASN102B, ASN142A, ASN142B, ASN166A, ASN166B, ASP120A, ASP120B, ASP127A, ASP127B, ASP14A, ASP14B, ASP5A, ASP5B, ASP74A, ASP74B, CYS126A, CYS126B, CYS143A, CYS143B, CYS163A, CYS163B, CYS75A, CYS75B, GLN133A, GLN133B, GLU175A, GLU175B, GLU180A, GLU180B, GLU77A, GLU77B, GLU82A, GLU82B, GLU9A, GLU9B, GLY176A, GLY176B, GLY177A, GLY177B, GLY73A, GLY73B, GLY76A, GLY76B, HIS129A, HIS129B, HIS83A, HIS83B, LEU122A, LEU122B, LEU134A, LEU134B, LEU198A, LEU198B, LEU211A, LEU212A, LEU212B, LEU84A, LEU84B, LEU88A, LEU88B, PHE4A, PHE4B, PHE8A, PHE8B, PRO106A, PRO106B, PRO162A, PRO162B, PRO164A, PRO164B, PRO172A, PRO172B, PRO213A, PRO7A, PRO7B, PRO86A, PRO86B, SER101A, SER101B, SER125A, SER125B, SER3A, SER3B, SER80A, SER80B, SER92A, SER92B, THR121A, THR121B, THR144A, THR144B, THR159A, THR159B, THR160A, THR160B, THR171A, THR171B, THR87A, THR87B, TRP181A, TRP181B, TYR131A, TYR131B, TYR78A, TYR78B, VAL100A, VAL100B, VAL123A, VAL123B, VAL128A, VAL128B, VAL161A, VAL161B, VAL173A, VAL173B, VAL174A, VAL174B, VAL71A, VAL71B, VAL91A, VAL91B
• A-C: ALA11C, ALA153C, ALA20C, ALA233A, ALA25A, ALA49A, ARG12C, ARG157C, ARG231A, ARG29A, ARG29C, ARG31A, ARG47A, ARG47C, ARG6C, ASP199A, ASP5C, GLN50A, GLU22C, GLU26A, GLU26C, GLU33A, GLU52A, GLU72A, GLU72C, GLU9C, GLY152C, GLY155C, GLY27A, GLY27C, GLY28A, GLY28C, GLY51A, GLY73C, HIS21C, LEU151C, LEU154C, LEU156C, LEU30A, PHE8C, PRO230A, PRO232A, PRO32A, PRO7C, THR159C, THR23C
• A-D: ARG105A, ARG157D, ARG231A, ARG6D, ASP74A, GLN50A, GLU72A, GLU9D, GLY73A, LEU198A, PRO7D, THR159D
• B-C: ARG103C, ARG6B
• B-D: ALA10D, ALA11D, ARG12D, ARG148D, ARG157D, ARG6B, ARG6D, ASP14D, ASP5B, GLU9D, GLY15D, PHE4B, PHE8D, PRO13D, PRO158D, PRO7B, PRO7D, SER3B, SER3D
• C-D: ALA10C, ALA10D, ALA124C, ALA124D, ALA132C, ALA132D, ALA178C, ALA178D, ARG103C, ARG103D, ARG104C, ARG104D, ARG105C, ARG105D, ARG12C, ARG12D, ARG130C, ARG130D, ARG148C, ARG148D, ARG6C, ARG6D, ARG85C, ARG85D, ARG89C, ARG89D, ARG90C, ARG90D, ARG94C, ARG94D, ASN102C, ASN102D, ASN142C, ASN142D, ASN166C, ASN166D, ASP120C, ASP120D, ASP127C, ASP127D, ASP14C, ASP14D, ASP5C, ASP5D, ASP74C, ASP74D, CYS126C, CYS126D, CYS143C, CYS143D, CYS163C, CYS163D, CYS75C, CYS75D, GLN133C, GLN133D, GLU175C, GLU175D, GLU180C, GLU180D, GLU72D, GLU77C, GLU77D, GLU82C, GLU82D, GLU9C, GLU9D, GLY176C, GLY176D, GLY177C, GLY177D, GLY73C, GLY73D, GLY76C, GLY76D, HIS129C, HIS129D, HIS83C, HIS83D, LEU122C, LEU122D, LEU134C, LEU134D, LEU198C, LEU198D, LEU211D, LEU212C, LEU212D, LEU84C, LEU84D, LEU88C, LEU88D, PHE4C, PHE4D, PHE8C, PHE8D, PRO106C, PRO106D, PRO162C, PRO162D, PRO164C, PRO164D, PRO172C, PRO213D, PRO7C, PRO7D, PRO86C, PRO86D, SER101C, SER101D, SER125C, SER125D, SER3C, SER3D, SER80C, SER80D, SER92C, SER92D, THR121C, THR121D, THR144C, THR144D, THR159C, THR159D, THR160C, THR160D, THR171C, THR171D, THR87C, THR87D, TRP181C, TRP181D, TYR131C, TYR131D, TYR78C, TYR78D, VAL100C, VAL100D, VAL123C, VAL123D, VAL128C, VAL128D, VAL161C, VAL161D, VAL173C, VAL173D, VAL174C, VAL174D, VAL71C, VAL71D, VAL91C, VAL91D