3SIV

structure of a hprp31-15.5k-u4atac 5' stem loop complex, dimeric form

• Total interactions analyzed: 66
• Total true interactions: 4
• Strongest Interaction:
  • Chains: J-K
  • Int. Res.: 63
  • Norm. En. per Res.: -2.214
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-16.8215	29.3614	-116.124	-103.5841	59	3	3	5844	1	16	15
D-E	-25.8079	22.3469	-125.857	-129.318	62	6	3	6243	1	16	16
G-H	-16.4237	31.0635	-110.681	-96.0412	60	4	3	5594	0	14	15
J-K	-28.3648	12.8112	-123.928	-139.4816	63	3	3	6110	2	16	17

Interface residues

• A-B: ALA101A, ALA246B, ALA297B, ALA302B, ALA303B, ALA39A, ALA42A, ARG304B, ARG48A, ARG97A, ASN218B, ASN248B, ASN40A, ASN47A, ASN7A, ASP306B, ASP75A, CYS247B, GLU310B, GLU319B, GLU323B, GLU41A, GLU61A, GLU64A, GLY317B, GLY38A, HIS309B, HIS68A, ILE100A, ILE249B, ILE65A, ILE66A, LEU301B, LEU320B, LEU63A, LEU67A, LEU69A, LEU71A, LEU72A, LYS243B, LYS298B, LYS315B, LYS327B, LYS44A, LYS9A, MET244B, PHE308B, PRO245B, PRO62A, PRO70A, SER242B, SER307B, SER311B, THR239B, THR300B, THR43A, THR45A, VAL305B, VAL316B
• D-E: ALA101D, ALA246E, ALA297E, ALA302E, ALA303E, ALA39D, ALA42D, ARG304E, ARG48D, ARG97D, ASN218E, ASN240E, ASN248E, ASN40D, ASN47D, ASP306E, ASP75D, CYS247E, CYS73D, GLU310E, GLU319E, GLU41D, GLU61D, GLU64D, GLU74D, GLY317E, GLY38D, HIS309E, HIS68D, ILE100D, ILE249E, ILE65D, ILE66D, LEU241E, LEU301E, LEU320E, LEU46D, LEU63D, LEU67D, LEU69D, LEU71D, LEU72D, LYS243E, LYS298E, LYS315E, LYS327E, LYS44D, LYS9D, MET244E, PHE308E, PRO245E, PRO62D, PRO70D, SER242E, SER307E, SER311E, THR239E, THR300E, THR43D, THR45D, VAL305E, VAL316E
• G-H: ALA101G, ALA246H, ALA297H, ALA302H, ALA303H, ALA39G, ALA42G, ALA60G, ARG304H, ARG48G, ARG97G, ASN218H, ASN248H, ASN40G, ASN47G, ASN7G, ASP306H, ASP75G, CYS247H, GLU310H, GLU319H, GLU41G, GLU61G, GLU64G, GLY38G, HIS309H, HIS68G, ILE100G, ILE249H, ILE65G, ILE66G, LEU301H, LEU320H, LEU46G, LEU63G, LEU67G, LEU69G, LEU71G, LEU72G, LYS243H, LYS298H, LYS315H, LYS327H, LYS44G, LYS76G, LYS9G, MET244H, PHE308H, PRO245H, PRO62G, PRO70G, SER242H, SER307H, SER311H, THR239H, THR300H, THR43G, THR45G, VAL305H, VAL316H
• J-K: ALA101J, ALA246K, ALA297K, ALA302K, ALA303K, ALA39J, ALA42J, ALA60J, ARG304K, ARG48J, ARG97J, ASN218K, ASN240K, ASN248K, ASN40J, ASN47J, ASP306K, ASP75J, CYS247K, CYS73J, GLU310K, GLU319K, GLU323K, GLU41J, GLU61J, GLU64J, GLU74J, GLY317K, GLY38J, HIS68J, ILE100J, ILE249K, ILE65J, ILE66J, LEU241K, LEU301K, LEU320K, LEU46J, LEU63J, LEU67J, LEU69J, LEU71J, LEU72J, LYS243K, LYS298K, LYS315K, LYS327K, LYS44J, LYS9J, MET244K, PHE308K, PRO245K, PRO62J, PRO70J, SER242K, SER307K, SER311K, THR239K, THR300K, THR43J, THR45J, VAL305K, VAL316K