3SGF
crystal structure of release factor rf3 trapped in the gtp state on a rotated conformation of the ribosome
Total interactions analyzed 595
Total true interactions 39
Strongest Interaction Chains 8-G
Int. Res. 10
Norm. En. per Res. -4.08
Hub Node H(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
0-7 0.0 0.0 -0.0008 -0.0008 2 0 0 2 0 2 2
0-Q 0.0 0.0 -0.0102 -0.0102 6 0 0 13 0 0 0
0-S 0.0 -5.6294 -2.5311 -8.1605 17 0 0 259 0 6 10
2-X 0.0 8.3249 -76.3369 -68.0119 46 7 1 4083 0 9 16
4-R -9.6437 4.6213 -72.5344 -77.5568 40 2 5 3676 0 10 19
4-U 0.0 17.5473 -13.4406 4.1067 12 1 0 649 0 0 6
4-W -5.3476 -5.6725 -51.4939 -62.5141 47 6 9 3709 2 11 8
5-7 0.0 1.2363 -20.1397 -18.9034 16 5 0 1085 0 1 6
6-E 0.0 0.0 -0.004 -0.004 2 0 0 6 0 0 0
6-X 0.0 0.0 -0.1888 -0.1888 9 0 0 81 0 1 3
7-P -22.6449 12.8226 -169.656 -179.4783 60 19 5 8281 0 4 34
8-G -13.0174 -18.8164 -8.9657 -40.7995 10 1 0 403 1 2 4
8-N 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 1
8-Q 0.0 0.0 -0.0113 -0.0113 2 0 0 11 0 0 1
D-N 0.0 2.7218 -15.0606 -12.3388 11 1 1 857 0 0 8
D-O -5.0463 -6.4841 -28.0461 -39.5765 19 5 0 1069 0 2 6
D-R -2.6637 3.7189 -19.6713 -18.6161 17 0 0 1057 0 0 10
D-T -17.5742 7.6974 -148.246 -158.1228 62 20 6 6905 2 12 12
E-P 0.0 2.1047 -116.197 -114.0923 48 4 6 5680 1 8 8
E-U 0.0 0.0 -0.3896 -0.3896 6 0 0 106 0 0 2
H-I 0.0 0.0 -11.8225 -11.8225 26 0 2 845 0 11 7
H-J 0.0 12.7378 -37.5268 -24.789 34 1 3 2351 0 9 5
H-K -4.0404 -25.109 -62.8381 -91.9874 49 11 1 2795 3 5 9
H-L -5.1007 0.2657 -114.446 -119.2811 40 19 9 5363 0 12 6
H-M 0.0 -12.1975 -58.2671 -70.4646 39 8 1 3067 1 10 7
J-K -27.8401 -11.0881 -61.637 -100.5652 45 16 2 3786 1 12 13
J-L 0.0 0.0 -3.956 -3.956 6 0 0 245 0 1 0
J-M 0.0 0.0 -54.2056 -54.2056 25 19 3 2318 0 0 2
K-M 0.0 -1.6883 -25.1594 -26.8477 13 9 1 1144 0 2 1
L-M 0.0 -2.6745 -92.1576 -94.8321 53 13 2 4314 0 13 16
N-U 0.0 0.0 -79.1152 -79.1152 47 7 4 4402 0 9 23
N-V 0.0 0.0 -7.2226 -7.2226 11 0 0 536 0 0 4
O-T -61.633 -56.6704 -166.252 -284.5554 75 17 3 7012 5 29 29
P-U 0.0 0.0 -0.0051 -0.0051 8 0 0 9 0 0 2
P-V -3.8042 2.8002 -33.4866 -34.4906 23 0 1 1410 0 0 12
Q-Z -6.9157 -2.6697 -82.516 -92.1014 54 6 4 3762 0 4 11
R-T 0.0 0.0 -0.0055 -0.0055 2 0 0 5 0 0 0
R-W -5.1478 0.0 -10.525 -15.6728 11 2 0 301 0 2 2
U-V -21.4658 -7.2533 -243.741 -272.4601 101 32 8 10889 2 23 50