3SDY

crystal structure of broadly neutralizing antibody cr8020 bound to the influenza a h3 hemagglutinin

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: B-H
  • Int. Res.: 51
  • Norm. En. per Res.: -3.9067
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-204.8573	-90.0609	-48.5459	-343.4641	212	48	24	31266	4	64	52
A-H	0.0	0.0	-14.2176	-14.2176	23	0	0	877	0	1	0
B-H	-30.8165	1.1468	-169.571	-199.2406	51	6	0	5969	0	5	5
B-L	-3.6232	-13.6079	-33.1974	-50.4286	37	1	0	1433	0	3	1
H-L	-28.6138	-44.7652	-435.891	-509.2701	188	25	12	18201	3	24	16

Interface residues

• A-B: ALA101B, ALA106A, ALA113A, ALA11A, ALA130B, ALA166B, ALA19A, ALA304A, ALA317A, ALA35B, ALA36B, ALA39A, ALA44B, ALA5B, ALA7B, ALA96B, ARG109A, ARG153B, ARG25B, ARG269A, ARG321A, ARG54B, ASN104B, ASN116B, ASN12B, ASN135B, ASN169B, ASN22A, ASN28B, ASN290A, ASN296A, ASN298A, ASN322A, ASN38A, ASN49B, ASN53B, ASN60B, ASN95B, ASP109B, ASP112B, ASP145B, ASP19B, ASP291A, ASP31A, ASP32A, ASP37B, ASP86B, ASP90B, CYS137B, CYS144B, CYS148B, CYS14A, CYS281A, CYS305A, GLN105B, GLN125B, GLN27B, GLN295A, GLN311A, GLN327A, GLN34B, GLN65B, GLU103B, GLU114B, GLU11B, GLU120B, GLU131B, GLU150B, GLU15B, GLU165B, GLU280A, GLU30B, GLU325A, GLU35A, GLU41A, GLU57B, GLU61B, GLU67B, GLU69B, GLU72B, GLU74B, GLU81B, GLU85B, GLU97B, GLY10A, GLY123B, GLY136B, GLY13B, GLY16A, GLY16B, GLY1B, GLY20B, GLY23B, GLY263A, GLY303A, GLY319A, GLY31B, GLY33B, GLY8B, HIS106B, HIS142B, HIS17A, HIS18A, HIS26B, HIS64B, ILE108B, ILE10B, ILE140B, ILE149B, ILE152B, ILE18B, ILE267A, ILE282A, ILE29A, ILE300A, ILE34A, ILE45B, ILE48B, ILE56B, ILE66B, ILE6B, ILE89B, LEU102B, LEU110B, LEU111A, LEU118B, LEU126B, LEU13A, LEU15A, LEU25A, LEU314A, LEU316A, LEU42A, LEU52B, LEU91B, LEU98B, LEU99B, LYS117B, LYS121B, LYS139B, LYS143B, LYS264A, LYS27A, LYS292A, LYS299A, LYS307A, LYS310A, LYS315A, LYS326A, LYS51B, LYS58B, LYS62B, LYS68B, LYS82B, LYS88B, MET115B, MET133B, MET17B, MET268A, MET320A, PHE119B, PHE138B, PHE24B, PHE294A, PHE63B, PHE70B, PHE9B, PRO21A, PRO284A, PRO289A, PRO293A, PRO306A, PRO324A, PRO9A, SER110A, SER114A, SER265A, SER266A, SER29B, SER71B, SER93B, THR107B, THR111B, THR122B, THR12A, THR283A, THR28A, THR301A, THR30A, THR313A, THR318A, THR32B, THR37A, THR40A, THR41B, THR59B, TRP14B, TRP21B, TRP92B, TYR141B, TYR22B, TYR302A, TYR308A, TYR94B, VAL100B, VAL20A, VAL26A, VAL309A, VAL323A, VAL36A, VAL43A, VAL55B
• A-H: ALA19A, ALA52H, ARG94H, ASN22A, CYS14A, GLN327A, GLU325A, GLY26H, LEU98H, LYS326A, PHE29H, PHE32H, PRO21A, PRO324A, PRO97H, SER31H, THR28H, THR30H, THR73H, TYR27H, TYR53H, VAL20A, VAL2H
• B-H: ALA35B, ALA36B, ARG153B, ARG25B, ARG94H, ASN102H, ASN12B, ASN146B, ASN28B, ASN54H, ASP101H, ASP19B, ASP56H, GLN27B, GLN34B, GLU15B, GLU30B, GLU95H, GLY13B, GLY16B, GLY20B, GLY26H, GLY31B, GLY33B, GLY33H, HIS26B, ILE18B, LEU100H, LEU38B, LEU98H, MET17B, PHE24B, PHE29H, PHE32H, PHE99H, PRO96H, PRO97H, SER100H, SER29B, SER31H, THR28H, THR30H, THR32B, TRP100H, TRP14B, TRP50H, TYR100H, TYR27H, TYR53H, TYR58H, VAL2H
• B-L: ALA147B, ALA35B, ALA36B, ALA55L, ARG153B, ARG53L, ARG54L, ASN146B, ASN154B, ASP19B, ASP37B, CYS148B, GLN34B, GLN42B, GLU150B, GLU30B, GLY20B, GLY33B, GLY50L, GLY92L, HIS26B, ILE149B, ILE18B, ILE45B, LEU38B, LEU46L, MET30L, SER151B, SER29L, SER52L, THR41B, THR56L, THR93L, TRP21B, TYR32L, TYR49L, TYR91L
• H-L: ALA125H, ALA130L, ALA136H, ALA137H, ALA168H, ALA34L, ALA43L, ALA51L, ALA55L, ALA60H, ALA93H, ARG142L, ARG38H, ARG45L, ARG53L, ARG94H, ARG96L, ASN102H, ASN137L, ASN138L, ASP101H, ASP122L, ASP144H, ASP167L, ASP170L, CYS134L, CYS140H, CYS214L, CYS88L, CYS92H, GLN100L, GLN105H, GLN124L, GLN160L, GLN166L, GLN171H, GLN37L, GLN38L, GLN39H, GLN42L, GLN43H, GLN61H, GLN6H, GLN89L, GLN90L, GLU123L, GLU161L, GLU165L, GLU1L, GLU213L, GLU46H, GLU95H, GLY101L, GLY104H, GLY106H, GLY139H, GLY162H, GLY174H, GLY41L, GLY42H, GLY44H, GLY49H, GLY50L, GLY92L, GLY99L, HIS164H, ILE117L, ILE37H, ILE48H, ILE48L, ILE51H, LEU100H, LEU124H, LEU125L, LEU135L, LEU136L, LEU138H, LEU141H, LEU170H, LEU175H, LEU175L, LEU178H, LEU179L, LEU181L, LEU33L, LEU45H, LEU46L, LEU47L, LEU98H, LYS126L, LYS129H, LYS143H, LYS169L, LYS207L, LYS209H, LYS214H, LYS39L, LYS62H, MET30L, PHE116L, PHE118L, PHE122H, PHE139L, PHE166H, PHE209L, PHE36L, PHE63H, PHE98L, PHE99H, PRO119L, PRO120L, PRO123H, PRO126H, PRO167H, PRO213H, PRO44L, PRO95L, PRO96H, SER100H, SER114L, SER120H, SER121L, SER127H, SER127L, SER128H, SER131L, SER159L, SER161H, SER162L, SER168L, SER172H, SER173H, SER174L, SER176L, SER177H, SER177L, SER179H, SER180H, SER208L, SER215H, SER29L, SER35H, SER94L, THR129L, THR135H, THR160H, THR164L, THR165H, THR172L, THR178L, THR180L, THR183H, THR206L, THR56L, THR93L, THR97L, TRP100H, TRP103H, TRP35L, TRP36H, TRP47H, TRP50H, TYR100H, TYR173L, TYR176H, TYR32L, TYR49L, TYR58H, TYR59H, TYR86L, TYR87L, TYR91H, TYR91L, VAL115L, VAL121H, VAL132L, VAL133L, VAL142H, VAL163H, VAL163L, VAL169H, VAL181H, VAL182H, VAL184H, VAL205L, VAL211H, VAL85L, VAL89H