3SAM

structure of d13, the scaffolding protein of vaccinia virus (mutant d513g)

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 261
  • Norm. En. per Res.: -3.6434
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-165.9226	-0.3641	-784.637	-950.9236	261	28	24	30474	4	35	40
A-C	-140.7364	-1.8912	-748.234	-890.8616	257	23	23	28411	3	32	41
B-C	-158.4918	5.7642	-817.783	-970.5106	272	40	26	31815	3	39	41

Interface residues

• A-B: ALA0A, ALA125A, ALA23A, ALA252B, ALA367B, ALA375A, ALA382B, ALA494A, ALA65B, ARG18A, ARG18B, ARG378A, ARG446A, ARG461B, ARG475B, ARG488A, ARG488B, ARG498A, ARG59B, ASN121A, ASN121B, ASN122A, ASN20A, ASN20B, ASN221B, ASN2A, ASN2B, ASN334A, ASN334B, ASN389B, ASN3A, ASN3B, ASN449A, ASN456B, ASN464B, ASN471B, ASN472B, ASN480B, ASN495A, ASN67A, ASN67B, ASN7A, ASN7B, ASP163A, ASP166A, ASP166B, ASP25A, ASP279B, ASP327B, ASP333B, ASP374A, ASP438B, ASP450A, ASP60B, CYS119A, GLN223B, GLN27A, GLN27B, GLN35A, GLN35B, GLN61B, GLU134A, GLU165A, GLU165B, GLU211A, GLU280B, GLU317B, GLU455B, GLU465B, GLU74A, GLY11B, GLY216A, GLY216B, GLY319B, GLY370B, GLY448A, GLY457B, GLY473B, HIS128A, HIS383B, HIS68A, ILE10A, ILE10B, ILE124A, ILE158A, ILE16A, ILE16B, ILE215A, ILE215B, ILE224B, ILE284B, ILE28A, ILE28B, ILE332B, ILE368B, ILE37A, ILE37B, ILE380A, ILE390B, ILE459B, ILE462B, ILE485B, ILE492A, ILE492B, ILE58B, ILE5A, ILE5B, ILE63B, ILE6A, ILE6B, LEU126A, LEU142A, LEU171B, LEU212A, LEU255B, LEU31A, LEU31B, LEU39A, LEU39B, LEU452A, LEU452B, LEU466B, LEU467B, LEU477A, LEU477B, LEU503A, LEU66B, LEU69A, LEU71A, LEU73A, LEU9A, LEU9B, LYS127A, LYS159A, LYS172B, LYS17A, LYS220B, LYS225B, LYS281B, LYS331B, LYS377A, LYS436B, LYS469B, LYS484B, LYS500A, LYS534B, MET1A, MET218A, MET218B, MET33A, MET33B, PHE168A, PHE168B, PHE214A, PHE214B, PHE228B, PHE22A, PHE22B, PHE447A, PHE479A, PHE479B, PHE481A, PHE481B, PHE486A, PHE486B, PHE487A, PHE487B, PRO226B, PRO29A, PRO29B, PRO34A, PRO34B, PRO458B, PRO483A, PRO483B, PRO489B, SER129A, SER132A, SER133A, SER15A, SER169B, SER170A, SER170B, SER19A, SER19B, SER213A, SER227B, SER254B, SER26A, SER26B, SER366B, SER373A, SER38A, SER38B, SER454A, SER454B, SER460B, SER470B, SER72A, SER8A, SER8B, THR123A, THR153A, THR167A, THR167B, THR253B, THR30A, THR30B, THR369B, THR371A, THR371B, THR376A, THR468B, THR474B, THR476B, THR478B, THR482A, THR482B, THR490A, THR490B, THR491A, THR491B, THR493A, THR493B, THR4A, THR4B, THR64B, TYR155A, TYR157A, TYR217A, TYR217B, TYR276A, TYR329B, TYR32A, TYR32B, TYR36A, TYR36B, TYR372A, TYR453A, TYR453B, TYR463B, TYR537B, TYR62B, TYR92A, VAL154A, VAL156A, VAL219B, VAL21A, VAL21B, VAL222B, VAL24A, VAL24B, VAL330B, VAL335B, VAL341B, VAL445A, VAL445B, VAL451A, VAL451B, VAL535B, VAL70A
• A-C: ALA0C, ALA125C, ALA23C, ALA251A, ALA252A, ALA367A, ALA375C, ALA382A, ALA494C, ALA65A, ARG18A, ARG18C, ARG378C, ARG446C, ARG461A, ARG475A, ARG488A, ARG488C, ARG498C, ARG59A, ASN-6C, ASN121A, ASN121C, ASN122C, ASN20A, ASN20C, ASN221A, ASN2A, ASN334A, ASN334C, ASN389A, ASN3A, ASN449C, ASN456A, ASN464A, ASN471A, ASN472A, ASN480A, ASN495C, ASN67A, ASN67C, ASN7A, ASP163C, ASP166A, ASP166C, ASP25C, ASP279A, ASP333A, ASP374C, ASP438A, ASP450C, ASP60A, CYS119C, GLN-2C, GLN223A, GLN27A, GLN27C, GLN35A, GLN35C, GLN61A, GLU134C, GLU165A, GLU165C, GLU211C, GLU280A, GLU317A, GLU455A, GLU465A, GLU57A, GLY-1C, GLY216A, GLY216C, GLY319A, GLY370A, GLY448C, GLY457A, GLY473A, HIS128C, HIS383A, HIS68C, ILE10A, ILE124C, ILE158C, ILE16A, ILE16C, ILE215A, ILE215C, ILE224A, ILE284A, ILE28A, ILE28C, ILE332A, ILE368A, ILE37A, ILE37C, ILE380C, ILE390A, ILE459A, ILE462A, ILE485A, ILE492A, ILE492C, ILE58A, ILE5A, ILE63A, ILE6A, LEU-5C, LEU126C, LEU142C, LEU171A, LEU212C, LEU255A, LEU31A, LEU31C, LEU39A, LEU39C, LEU443A, LEU452A, LEU452C, LEU466A, LEU467A, LEU477A, LEU477C, LEU532A, LEU66A, LEU69C, LEU71C, LEU9A, LYS127C, LYS159C, LYS172A, LYS17C, LYS220A, LYS225A, LYS281A, LYS331A, LYS377C, LYS436A, LYS469A, LYS484A, LYS500C, LYS534A, MET1C, MET218A, MET33A, MET33C, PHE-3C, PHE168A, PHE168C, PHE214A, PHE214C, PHE228A, PHE22A, PHE22C, PHE447A, PHE447C, PHE479A, PHE479C, PHE481A, PHE481C, PHE486A, PHE486C, PHE487A, PHE487C, PRO226A, PRO29A, PRO29C, PRO34A, PRO34C, PRO458A, PRO483A, PRO483C, PRO489A, SER129C, SER132C, SER133C, SER169A, SER170A, SER170C, SER19A, SER19C, SER213C, SER227A, SER254A, SER26A, SER26C, SER277C, SER366A, SER373C, SER38A, SER38C, SER40A, SER454A, SER454C, SER460A, SER470A, SER72C, SER8A, THR123C, THR153C, THR167A, THR167C, THR253A, THR30A, THR30C, THR369A, THR371A, THR371C, THR376C, THR468A, THR474A, THR476A, THR478A, THR482A, THR482C, THR490A, THR490C, THR491A, THR491C, THR493A, THR493C, THR4A, THR64A, TYR-4C, TYR155C, TYR157C, TYR217A, TYR217C, TYR276C, TYR329A, TYR32A, TYR32C, TYR36A, TYR36C, TYR372C, TYR453A, TYR453C, TYR463A, TYR537A, TYR62A, TYR92C, VAL154C, VAL156C, VAL219A, VAL21A, VAL21C, VAL222A, VAL24C, VAL330A, VAL335A, VAL341A, VAL445A, VAL445C, VAL451A, VAL451C, VAL535A, VAL70C
• B-C: ALA0B, ALA0C, ALA125B, ALA23B, ALA251B, ALA251C, ALA252C, ALA367C, ALA375B, ALA382C, ALA494B, ALA65C, ARG18B, ARG18C, ARG378B, ARG442B, ARG446B, ARG461C, ARG475C, ARG488B, ARG488C, ARG506B, ARG59C, ASN-6C, ASN121B, ASN121C, ASN122B, ASN20B, ASN20C, ASN221C, ASN2B, ASN334B, ASN334C, ASN389C, ASN3B, ASN449B, ASN456C, ASN464C, ASN471C, ASN472C, ASN480C, ASN495B, ASN67B, ASN67C, ASN7B, ASP14B, ASP163B, ASP166B, ASP166C, ASP25B, ASP279C, ASP333C, ASP374B, ASP450B, ASP60C, CYS119B, GLN-2C, GLN223C, GLN27B, GLN27C, GLN35B, GLN35C, GLN61C, GLU-7C, GLU134B, GLU165B, GLU165C, GLU211B, GLU280C, GLU317C, GLU444B, GLU455B, GLU455C, GLU465C, GLU57C, GLY-1B, GLY-1C, GLY11B, GLY216B, GLY216C, GLY319C, GLY370C, GLY457C, GLY473C, HIS128B, HIS250B, HIS383C, HIS68B, ILE10B, ILE124B, ILE158B, ILE16B, ILE16C, ILE215B, ILE215C, ILE224C, ILE284C, ILE28B, ILE28C, ILE332C, ILE368C, ILE37B, ILE37C, ILE380B, ILE390C, ILE459C, ILE462C, ILE485C, ILE492B, ILE492C, ILE58C, ILE5B, ILE63C, ILE6B, LEU-5C, LEU126B, LEU142B, LEU171C, LEU173C, LEU212B, LEU212C, LEU255C, LEU31B, LEU31C, LEU39C, LEU443B, LEU443C, LEU452B, LEU452C, LEU466C, LEU467C, LEU477C, LEU503B, LEU66C, LEU69B, LEU71B, LEU9B, LYS127B, LYS159B, LYS172C, LYS17B, LYS220C, LYS225C, LYS281C, LYS331C, LYS377B, LYS436C, LYS469C, LYS484C, LYS500B, LYS534C, MET1B, MET1C, MET218C, MET33B, MET33C, PHE-3C, PHE168B, PHE168C, PHE214B, PHE214C, PHE228C, PHE22B, PHE22C, PHE447B, PHE447C, PHE479B, PHE479C, PHE481B, PHE481C, PHE486B, PHE486C, PHE487B, PHE487C, PRO-10C, PRO226C, PRO29B, PRO29C, PRO34B, PRO34C, PRO458C, PRO483B, PRO483C, PRO489C, SER129B, SER132B, SER133B, SER15B, SER169C, SER170C, SER19B, SER19C, SER213B, SER213C, SER227C, SER254C, SER26B, SER26C, SER277B, SER366C, SER373B, SER38B, SER38C, SER40C, SER454B, SER454C, SER460C, SER470C, SER72B, SER8B, THR-8C, THR-9C, THR123B, THR153B, THR167B, THR167C, THR253C, THR30B, THR30C, THR369C, THR371B, THR371C, THR376B, THR468C, THR474C, THR476C, THR478C, THR482B, THR482C, THR490B, THR490C, THR491B, THR491C, THR493B, THR493C, THR4B, THR64C, TYR-4C, TYR155B, TYR157B, TYR217B, TYR217C, TYR276B, TYR329C, TYR32B, TYR32C, TYR36B, TYR36C, TYR372B, TYR453B, TYR453C, TYR463C, TYR537C, TYR62C, TYR92B, VAL154B, VAL156B, VAL164B, VAL219C, VAL21B, VAL21C, VAL222C, VAL24B, VAL330C, VAL335C, VAL341C, VAL445B, VAL451B, VAL451C, VAL508B, VAL535C, VAL70B