3RTY

structure of an enclosed dimer formed by the drosophila period protein

• Total interactions analyzed: 28
• Total true interactions: 12
• Strongest Interaction:
  • Chains: E-F
  • Int. Res.: 241
  • Norm. En. per Res.: -2.9842
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-27.9358	-74.475	-615.664	-718.0749	243	28	14	27017	4	54	47
A-C	-11.2226	-6.9318	-28.4007	-46.5551	39	1	0	1660	1	22	21
A-D	0.0	-7.4813	-18.7	-26.1813	34	0	0	1402	0	15	13
A-F	-18.1532	0.0	-64.0049	-82.1581	31	6	2	2846	0	10	6
B-D	-12.3277	-30.2556	-82.6753	-125.2587	59	7	1	3830	2	25	19
C-D	-37.9373	-45.5979	-617.851	-701.3862	243	41	14	27098	2	55	49
C-F	0.0	0.0	-0.0038	-0.0038	2	0	0	5	0	2	2
E-F	-34.1056	-68.0951	-616.998	-719.1988	241	33	15	26974	3	54	48
E-G	0.0	-4.1749	-17.315	-21.4899	30	2	0	1247	0	14	10
E-H	0.0	1.0573	-33.1475	-32.0902	48	3	0	2151	1	22	25
F-G	-4.6027	-43.7996	-67.1025	-115.5048	61	4	1	3514	2	25	19
G-H	-36.6079	-71.212	-619.296	-727.1159	245	23	14	26885	4	54	46

Interface residues

• A-B: ALA284A, ALA284B, ALA287A, ALA287B, ALA307B, ALA347A, ALA347B, ALA351B, ALA370B, ALA450A, ALA450B, ALA452A, ALA452B, ALA555A, ALA555B, ALA557A, ALA557B, ALA570A, ARG266A, ARG266B, ARG272A, ARG272B, ARG283A, ARG283B, ARG339B, ARG345A, ARG345B, ARG394A, ARG394B, ARG484A, ARG484B, ARG540A, ARG540B, ARG551A, ARG551B, ARG552B, ARG569A, ASN355B, ASN363A, ASN363B, ASN480A, ASN480B, ASP248A, ASP248B, ASP267A, ASP276A, ASP276B, ASP354B, ASP565A, ASP571A, CYS241A, CYS241B, CYS242A, CYS242B, CYS369A, CYS369B, CYS553A, CYS553B, GLN289A, GLN448A, GLN448B, GLN547A, GLN547B, GLN554A, GLN554B, GLU237B, GLU346A, GLU346B, GLU349A, GLU349B, GLU350A, GLU350B, GLU487A, GLU487B, GLU543A, GLU543B, GLU548B, GLU561A, GLU561B, GLU566A, GLU566B, GLY249A, GLY249B, GLY271A, GLY271B, GLY293A, GLY293B, GLY341B, GLY361A, GLY361B, GLY447A, GLY451A, GLY451B, HIS247A, HIS247B, HIS403A, HIS403B, HIS492B, ILE244A, ILE244B, ILE250A, ILE250B, ILE258B, ILE275A, ILE275B, ILE290A, ILE290B, ILE294A, ILE294B, ILE296A, ILE368A, ILE368B, LEU252A, LEU252B, LEU270A, LEU270B, LEU340B, LEU342A, LEU342B, LEU365A, LEU365B, LEU366A, LEU366B, LEU556A, LEU556B, LEU563A, LEU563B, LEU572A, LEU574A, LYS236B, LYS308A, LYS308B, LYS446A, LYS446B, LYS546A, LYS546B, LYS573A, MET246A, MET246B, MET364A, MET364B, MET560A, MET560B, MET564A, MET564B, PHE240A, PHE240B, PHE274A, PHE274B, PHE286A, PHE286B, PHE311B, PHE344A, PHE344B, PHE478A, PHE478B, PHE488A, PHE488B, PHE559A, PHE559B, PRO256A, PRO256B, PRO295A, PRO348A, PRO348B, PRO353B, PRO481A, PRO481B, PRO541A, PRO541B, SER239A, SER239B, SER245A, SER245B, SER257B, SER273A, SER273B, SER288A, SER288B, SER309B, SER453A, SER453B, SER477A, SER477B, SER483A, SER483B, SER539A, SER539B, SER542A, SER542B, SER550A, SER550B, SER558A, SER558B, SER568A, THR254A, THR254B, THR255A, THR255B, THR291A, THR291B, THR292A, THR292B, THR310B, THR343A, THR343B, THR362A, THR362B, THR371B, THR396A, THR396B, THR449A, THR449B, THR476A, THR476B, THR544A, THR544B, THR562A, THR562B, TRP269A, TRP482A, TRP482B, TYR253A, TYR253B, TYR356B, VAL243A, VAL243B, VAL251A, VAL251B, VAL278B, VAL367A, VAL367B, VAL479A, VAL479B, VAL489B, VAL490A, VAL490B, VAL538A, VAL538B, VAL545B, VAL549A, VAL549B, VAL567A
• A-C: ALA535C, ARG317A, ARG319A, ARG484C, ASN480C, ASN503A, ASP238A, ASP260A, GLU237A, GLU336A, GLU487C, GLU528C, GLU536C, GLY263A, ILE258A, ILE400C, LEU262A, LYS236A, LYS374A, LYS485C, LYS532C, PRO265A, PRO372A, PRO481C, SER239A, SER257A, SER334A, SER423C, SER483C, THR259A, THR398C, THR537C, TRP482C, TYR318A, TYR335A, VAL261A, VAL333A, VAL531C, VAL538C
• A-D: ALA284D, ALA287D, ALA507D, ALA508D, ARG266A, ARG272D, ARG283D, ASP260A, ASP276D, ASP282D, CB8.13969-4.41639, CYS241A, CYS511D, GLN520D, GLU349A, GLU350A, HIS279D, ILE275D, LEU280D, LEU513D, LYS236A, LYS236A5, LYS281D, LYS512D, LYS514D, PHE240A, PRO256A, SER239A, SER257A, SER273D, THR254A, THR255A, THR285D, TYR253A
• A-F: ARG494F, ASP381A, ASP381F, GLN386A, GLN386F, GLN497A, GLU382A, GLU382F, GLU472F, GLY498A, ILE383A, ILE383F, LEU384A, LEU384F, LEU470A, LYS378A, LYS378F, LYS387A, LYS387F, LYS390F, LYS500A, PHE496A, PHE496F, PRO380A, PRO458F, SER385A, SER385F, SER388F, TYR377A, VAL379A, VAL379F
• B-D: ALA507D, ALA555B, ALA557B, ARG283D, ARG316D, ARG319D, ARG422D, ARG551B, ARG552B, ASP276D, ASP282D, ASP418D, ASP426D, ASP565B, CYS553B, GLN417D, GLN464D, GLN520D, GLN547B, GLN554B, GLU517D, GLU543B, GLU548B, GLU561B, GLU566B, GLY399D, GLY413D, GLY421D, HIS279D, ILE400D, ILE401D, ILE424D, LEU280D, LEU415D, LEU419D, LEU462D, LEU556B, LEU563B, LYS281D, LYS527D, MET314D, MET560B, MET564B, PHE277D, PHE427D, PHE505D, PHE559B, SER334D, SER423D, SER516D, SER521D, SER550B, SER558B, THR398D, THR562B, TYR335D, TYR414D, VAL278D, VAL333D
• C-D: ALA284C, ALA284D, ALA287C, ALA287D, ALA307C, ALA347C, ALA347D, ALA351C, ALA370C, ALA450C, ALA450D, ALA452C, ALA452D, ALA555C, ALA555D, ALA557C, ALA557D, ALA570D, ARG266C, ARG266D, ARG272C, ARG272D, ARG283C, ARG283D, ARG339C, ARG345C, ARG345D, ARG394C, ARG394D, ARG484C, ARG484D, ARG540C, ARG540D, ARG551C, ARG551D, ARG552C, ARG569D, ASN355C, ASN363C, ASN363D, ASN480C, ASN480D, ASP248C, ASP248D, ASP267D, ASP276C, ASP276D, ASP354C, ASP565D, ASP571D, CYS241C, CYS241D, CYS242C, CYS242D, CYS369C, CYS369D, CYS553C, CYS553D, GLN448C, GLN448D, GLN547C, GLN547D, GLN554C, GLN554D, GLU237C, GLU346C, GLU346D, GLU349C, GLU349D, GLU350C, GLU350D, GLU487C, GLU487D, GLU543C, GLU543D, GLU548C, GLU548D, GLU561C, GLU561D, GLU566C, GLU566D, GLY249C, GLY249D, GLY271C, GLY271D, GLY293C, GLY293D, GLY341C, GLY361C, GLY361D, GLY447C, GLY447D, GLY451C, GLY451D, HIS247C, HIS247D, HIS403C, HIS403D, HIS492C, ILE244C, ILE244D, ILE250C, ILE250D, ILE258C, ILE275C, ILE275D, ILE290C, ILE290D, ILE294C, ILE294D, ILE296D, ILE368C, ILE368D, LEU252C, LEU252D, LEU270C, LEU270D, LEU340C, LEU342C, LEU342D, LEU365C, LEU365D, LEU366C, LEU366D, LEU556C, LEU556D, LEU563C, LEU563D, LEU572D, LEU574D, LYS236C, LYS308C, LYS308D, LYS446C, LYS446D, LYS546C, LYS546D, LYS573D, MET246C, MET246D, MET364C, MET364D, MET560C, MET560D, MET564C, MET564D, PHE240C, PHE240D, PHE274C, PHE274D, PHE286C, PHE286D, PHE311C, PHE344C, PHE344D, PHE478C, PHE478D, PHE488C, PHE488D, PHE559C, PHE559D, PRO256C, PRO256D, PRO295D, PRO348C, PRO348D, PRO353C, PRO481C, PRO481D, PRO541C, PRO541D, SER239C, SER239D, SER245C, SER245D, SER257D, SER273C, SER273D, SER288C, SER288D, SER309C, SER453C, SER453D, SER477C, SER477D, SER483C, SER483D, SER539C, SER539D, SER542C, SER542D, SER550C, SER550D, SER558C, SER558D, SER568D, THR254C, THR254D, THR255C, THR255D, THR291C, THR291D, THR292C, THR292D, THR310C, THR343C, THR343D, THR362C, THR362D, THR371C, THR396C, THR396D, THR449C, THR449D, THR476C, THR476D, THR544C, THR544D, THR562C, THR562D, TRP269D, TRP482C, TRP482D, TYR253C, TYR253D, TYR356C, VAL243C, VAL243D, VAL251C, VAL251D, VAL367C, VAL367D, VAL479C, VAL479D, VAL489C, VAL490C, VAL490D, VAL538C, VAL538D, VAL545C, VAL549C, VAL549D, VAL567D
• C-F: LYS445C, VAL379F
• E-F: ALA284F, ALA287E, ALA287F, ALA307F, ALA347E, ALA347F, ALA351F, ALA370F, ALA450E, ALA450F, ALA452E, ALA452F, ALA555E, ALA555F, ALA557E, ALA557F, ALA570E, ARG266E, ARG266F, ARG272E, ARG272F, ARG283E, ARG283F, ARG339F, ARG345E, ARG345F, ARG394E, ARG394F, ARG484E, ARG484F, ARG540E, ARG540F, ARG551E, ARG551F, ARG552F, ARG569E, ASN355F, ASN363E, ASN363F, ASN480E, ASN480F, ASP248E, ASP248F, ASP267E, ASP276E, ASP276F, ASP354F, ASP565E, ASP571E, CYS241E, CYS241F, CYS242E, CYS242F, CYS369E, CYS369F, CYS553E, CYS553F, GLN448E, GLN448F, GLN547E, GLN547F, GLN554E, GLN554F, GLU237F, GLU346E, GLU346F, GLU349E, GLU349F, GLU350E, GLU350F, GLU487E, GLU487F, GLU543E, GLU543F, GLU548F, GLU561E, GLU561F, GLU566E, GLU566F, GLY249E, GLY249F, GLY271E, GLY271F, GLY293E, GLY293F, GLY341F, GLY361E, GLY361F, GLY447E, GLY447F, GLY451E, GLY451F, HIS247E, HIS247F, HIS403E, HIS403F, HIS492F, ILE244E, ILE244F, ILE250E, ILE250F, ILE258F, ILE275E, ILE275F, ILE290E, ILE290F, ILE294E, ILE294F, ILE296E, ILE368E, ILE368F, LEU252E, LEU252F, LEU270E, LEU270F, LEU340F, LEU342E, LEU342F, LEU365E, LEU365F, LEU366E, LEU366F, LEU556E, LEU556F, LEU563E, LEU563F, LEU572E, LEU574E, LYS236F, LYS308F, LYS446E, LYS446F, LYS546E, LYS546F, LYS573E, MET246E, MET246F, MET364E, MET364F, MET560E, MET560F, MET564E, MET564F, PHE240E, PHE240F, PHE274E, PHE274F, PHE286E, PHE286F, PHE311F, PHE344E, PHE344F, PHE478E, PHE478F, PHE488E, PHE488F, PHE559E, PHE559F, PRO256E, PRO256F, PRO295E, PRO348E, PRO348F, PRO353F, PRO481E, PRO481F, PRO541E, PRO541F, SER239E, SER239F, SER245E, SER245F, SER257F, SER273E, SER273F, SER288E, SER288F, SER309F, SER402E, SER453E, SER453F, SER477E, SER477F, SER483E, SER483F, SER539E, SER539F, SER542E, SER542F, SER550E, SER550F, SER558E, SER558F, SER568E, THR254E, THR254F, THR255E, THR255F, THR291E, THR291F, THR292E, THR292F, THR310F, THR343E, THR343F, THR362E, THR362F, THR371F, THR396E, THR396F, THR449E, THR449F, THR476E, THR476F, THR544E, THR544F, THR562E, THR562F, TRP269E, TRP482E, TRP482F, TYR253E, TYR253F, TYR356F, VAL243E, VAL243F, VAL251E, VAL251F, VAL367E, VAL367F, VAL479E, VAL479F, VAL489F, VAL490E, VAL490F, VAL538E, VAL538F, VAL545F, VAL549E, VAL549F, VAL567E
• E-G: ALA284G, ALA287G, ALA507G, ALA508G, ARG266E, ARG283G, ASP248G, ASP260E, ASP276G, ASP282G, CYS241E, GLU349E, GLU350E, HIS279G, ILE275G, LEU280G, LEU513G, LYS236E, LYS281G, LYS512G, LYS514G, PHE240E, PRO256E, SER257E, SER273G, THR254E, THR255E, THR259E, THR285G, TYR253E
• E-H: ALA535H, ARG317E, ARG319E, ARG484H, ARG525H, ARG533H, ASN480H, ASN503E, ASP238E, ASP260E, CYS502E, GLU237E, GLU336E, GLU487H, GLU506E, GLU528H, GLU536H, GLY263E, GLY399H, GLY421H, ILE400H, LEU262E, LYS236E, LYS374E, LYS378E, LYS485H, LYS532H, PHE505E, PRO332E, PRO337E, PRO372E, PRO481H, SER239E, SER257E, SER334E, SER423H, SER483H, THR259E, THR396H, THR398H, THR524H, THR537H, TRP482H, TYR318E, TYR335E, VAL261E, VAL531H, VAL538H
• F-G: ALA507G, ALA555F, ALA557F, ARG283G, ARG316G, ARG319G, ARG422G, ARG551F, ARG552F, ASP276G, ASP282G, ASP418G, ASP426G, ASP565F, CYS553F, GLN417G, GLN464G, GLN520G, GLN547F, GLN554F, GLU543F, GLU548F, GLU561F, GLY413G, GLY421G, HIS279G, HIS430G, ILE400G, ILE424G, LEU280G, LEU415G, LEU433G, LEU462G, LEU556F, LYS281G, LYS512G, LYS514G, LYS527G, MET314G, MET425G, MET560F, MET564F, PHE427G, PHE505G, PHE559F, SER334G, SER423G, SER516G, SER550F, SER558F, THR398G, THR524G, THR544F, THR562F, TYR335G, TYR414G, TYR428G, TYR468G, VAL278G, VAL333G, VAL545F
• G-H: ALA284G, ALA284H, ALA287G, ALA287H, ALA307H, ALA347G, ALA347H, ALA351H, ALA370H, ALA450G, ALA450H, ALA452G, ALA452H, ALA555G, ALA555H, ALA557G, ALA557H, ALA570G, ARG266G, ARG266H, ARG272G, ARG272H, ARG283G, ARG283H, ARG339H, ARG345G, ARG345H, ARG394G, ARG394H, ARG484G, ARG484H, ARG540G, ARG540H, ARG551G, ARG551H, ARG552H, ARG569G, ASN355H, ASN363G, ASN363H, ASN480G, ASN480H, ASP248G, ASP248H, ASP267G, ASP276G, ASP276H, ASP354H, ASP565G, ASP571G, CYS241G, CYS241H, CYS242G, CYS242H, CYS369G, CYS369H, CYS553G, CYS553H, GLN289H, GLN448G, GLN448H, GLN547G, GLN547H, GLN554G, GLN554H, GLU237H, GLU346G, GLU346H, GLU349G, GLU349H, GLU350G, GLU350H, GLU487G, GLU487H, GLU543G, GLU543H, GLU548G, GLU548H, GLU561G, GLU561H, GLU566G, GLU566H, GLY249G, GLY249H, GLY271G, GLY271H, GLY293G, GLY293H, GLY341H, GLY361G, GLY361H, GLY447G, GLY447H, GLY451G, GLY451H, HIS247G, HIS247H, HIS403G, HIS403H, HIS492H, ILE244G, ILE244H, ILE250G, ILE250H, ILE258H, ILE275G, ILE275H, ILE290G, ILE290H, ILE294G, ILE294H, ILE296G, ILE368G, ILE368H, LEU252G, LEU252H, LEU270G, LEU270H, LEU340H, LEU342G, LEU342H, LEU365G, LEU365H, LEU366G, LEU366H, LEU556G, LEU556H, LEU563G, LEU563H, LEU572G, LEU574G, LYS236H, LYS308G, LYS308H, LYS446G, LYS546G, LYS546H, LYS573G, MET246G, MET246H, MET364G, MET364H, MET560G, MET560H, MET564G, MET564H, PHE240G, PHE240H, PHE274G, PHE274H, PHE286G, PHE286H, PHE311H, PHE344G, PHE344H, PHE478G, PHE478H, PHE488G, PHE488H, PHE559G, PHE559H, PRO256G, PRO256H, PRO295G, PRO348G, PRO348H, PRO353H, PRO481G, PRO481H, PRO541G, PRO541H, SER239G, SER239H, SER245G, SER245H, SER257G, SER257H, SER273G, SER273H, SER288G, SER288H, SER309H, SER453G, SER453H, SER477G, SER477H, SER483G, SER483H, SER539G, SER539H, SER542G, SER542H, SER550G, SER550H, SER558G, SER558H, SER568G, THR254G, THR254H, THR255G, THR255H, THR291G, THR291H, THR292G, THR292H, THR310H, THR343G, THR343H, THR362G, THR362H, THR371H, THR396G, THR396H, THR449G, THR449H, THR476G, THR476H, THR544G, THR544H, THR562G, THR562H, TRP269G, TRP482G, TRP482H, TYR253G, TYR253H, TYR356H, VAL243G, VAL243H, VAL251G, VAL251H, VAL278H, VAL367G, VAL367H, VAL479G, VAL479H, VAL489H, VAL490G, VAL490H, VAL538G, VAL538H, VAL545H, VAL549G, VAL549H, VAL567G