3RG6

crystal structure of a chaperone-bound assembly intermediate of form i rubisco

• Total interactions analyzed: 15
• Total true interactions: 11
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 157
  • Norm. En. per Res.: -3.6188
• Hub Node: A(5)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-C	0.0	0.0	-10.265	-10.265	9	0	0	452	0	0	1
A-D	-14.757	-29.5445	-111.769	-156.0705	53	7	0	4823	2	7	9
A-B	-104.2921	18.9822	-118.315	-203.6249	255	37	14	30633	9	58	68
A-E	0.0	5.3186	-88.2447	-82.9261	42	8	1	3156	0	19	13
A-F	-6.4324	7.0254	-129.714	-129.121	59	6	5	5296	0	19	14
C-D	-53.6122	-30.4168	-484.123	-568.1519	157	36	32	22371	3	66	44
C-B	0.0	0.0	-62.3117	-62.3117	40	2	1	2343	0	17	20
D-B	-8.923	-2.6803	-130.181	-141.7843	61	8	5	5146	0	18	16
B-E	0.0	0.0	-0.4837	-0.4837	6	0	0	81	0	0	1
B-F	-14.0732	-26.3832	-95.0279	-135.4843	49	6	0	4153	2	8	9
E-F	-23.2646	-33.9173	-469.609	-526.7909	154	16	30	21586	2	64	43

Interface residues

• A-C: ALA126A, ARG128A, ASN2C, GLN42A, ILE127A, LEU3C, LYS125A, MET1C, PRO43A
• A-D: ALA126A, ALA28D, ALA50A, ALA52A, ALA53A, ALA56A, ARG128A, ARG69D, ARG74D, ASN34D, ASP48A, ASP65D, GLN29D, GLN42A, GLU32D, GLU49A, GLU57A, GLU75D, GLU80D, GLY123A, GLY31D, GLY44A, GLY51A, GLY61A, HIS76D, ILE127A, ILE54A, ILE70D, ILE77D, LEU19A, LEU30D, LEU37D, LEU66D, LEU68D, LYS125A, LYS18A, LYS63D, PHE124A, PRO35D, PRO36D, PRO41A, PRO43A, PRO46A, THR20A, THR25D, THR33D, THR62A, THR72D, TRP63A, TYR21A, VAL26D, VAL45A, VAL73D
• A-B: ALA126A, ALA126B, ALA241A, ALA241B, ALA269A, ALA269B, ALA273A, ALA273B, ALA278A, ALA278B, ALA293A, ALA293B, ALA296A, ALA296B, ALA56A, ALA56B, ARG128A, ARG128B, ARG131A, ARG131B, ARG210A, ARG210B, ARG214B, ARG250A, ARG250B, ARG292A, ARG292B, ARG300A, ARG300B, ARG76A, ARG76B, ASN112A, ASN112B, ASN120A, ASN120B, ASN181A, ASN202A, ASN202B, ASN204A, ASN204B, ASN238A, ASN238B, ASN274A, ASN274B, ASN303A, ASN303B, ASP103A, ASP103B, ASP200A, ASP200B, ASP265A, ASP265B, ASP283A, ASP299A, ASP299B, ASP73A, ASP73B, CYS244A, CYS244B, GLN206A, GLN206B, GLN209A, GLN209B, GLN301A, GLN301B, GLN42A, GLN42B, GLU106A, GLU106B, GLU107A, GLU107B, GLU201A, GLU201B, GLU245A, GLU245B, GLU246A, GLU246B, GLU57A, GLU57B, GLY108A, GLY108B, GLY119A, GLY119B, GLY123A, GLY123B, GLY176A, GLY176B, GLY270A, GLY270B, GLY305A, GLY305B, GLY330A, GLY330B, GLY377A, GLY377B, GLY401B, GLY61A, GLY61B, GLY79B, HIS264A, HIS264B, HIS291A, HIS291B, HIS295A, HIS295B, HIS304A, HIS304B, HIS324A, ILE113A, ILE113B, ILE117A, ILE117B, ILE127A, ILE127B, ILE171B, ILE203A, ILE203B, ILE298A, ILE298B, ILE306A, ILE306B, LEU102A, LEU102B, LEU104A, LEU104B, LEU114A, LEU114B, LEU130A, LEU130B, LEU132A, LEU132B, LEU141A, LEU141B, LEU175A, LEU175B, LEU177A, LEU177B, LEU267A, LEU267B, LEU277A, LEU277B, LEU311A, LEU311B, LEU332A, LEU71B, LYS125A, LYS125B, LYS172A, LYS172B, LYS174A, LYS174B, LYS198A, LYS198B, LYS279A, LYS279B, LYS331A, LYS331B, LYS78B, MET247A, MET247B, MET248A, MET248B, MET263A, MET263B, MET294A, MET294B, MET74A, MET74B, PHE105A, PHE105B, PHE122A, PHE122B, PHE124A, PHE124B, PHE145A, PHE145B, PHE208A, PHE208B, PHE266A, PHE266B, PHE271A, PHE271B, PHE37A, PHE37B, PRO101A, PRO101B, PRO173A, PRO173B, PRO207A, PRO207B, PRO242A, PRO242B, SER109A, SER109B, SER116A, SER116B, SER129A, SER129B, SER178A, SER205A, SER205B, SER318A, SER318B, SER376A, SER376B, SER40A, SER40B, SER58A, SER58B, SER59A, SER59B, THR111A, THR111B, THR115A, THR115B, THR144A, THR144B, THR240A, THR240B, THR243A, THR243B, THR268A, THR268B, THR272A, THR272B, THR275A, THR275B, THR276A, THR276B, THR60A, THR60B, THR62A, THR72A, THR72B, TRP211A, TRP211B, TRP280A, TRP280B, TRP63A, TYR100A, TYR100B, TYR21A, TYR21B, TYR77A, TYR77B, VAL110A, VAL110B, VAL118A, VAL118B, VAL121A, VAL121B, VAL239A, VAL239B, VAL297A, VAL297B
• A-E: ALA337A, ALA46E, ARG24E, ARG300A, ASN2E, ASP335A, ASP51E, ASP9E, GLN21E, GLN50E, GLN5E, GLU333A, GLU465A, GLU467A, GLY334A, GLY47E, GLY52E, HIS42E, ILE6E, LEU14E, LEU18E, LEU23E, LEU332A, LEU3E, LYS331A, LYS336A, LYS463A, LYS48E, LYS4E, LYS8E, MET469A, PHE464A, PHE466A, SER16E, SER45E, THR13E, THR19E, THR468A, TYR17E, TYR20E, VAL328A, VAL49E
• A-F: ALA28F, ALA38F, ALA46F, ARG24F, ARG300A, ASN43F, ASP457A, ASP51F, ASP9F, GLN15F, GLN21F, GLN50F, GLU32F, GLU461A, GLU465A, GLU467A, GLY31F, GLY330A, GLY378A, GLY401A, GLY405A, GLY47F, GLY52F, HIS380A, HIS42F, ILE462A, LEU14F, LEU18F, LEU23F, LEU27F, LEU332A, LEU39F, LEU41F, LEU458A, LYS12F, LYS331A, LYS460A, LYS463A, LYS48F, PHE44F, PHE464A, PHE466A, PRO35F, PRO36F, PRO407A, SER16F, SER45F, THR13F, THR19F, THR25F, THR468A, TRP382A, TRP40F, TRP459A, TYR17F, TYR20F, TYR55F, VAL329A, VAL49F
• C-D: ALA11C, ALA11D, ALA22C, ALA22D, ALA28C, ALA28D, ALA67C, ALA67D, ALA78C, ALA78D, ALA7C, ALA7D, ALA82C, ALA82D, ALA96C, ALA96D, ARG101C, ARG101D, ARG102C, ARG102D, ARG107C, ARG107D, ARG24C, ARG24D, ARG69C, ARG69D, ARG74C, ARG74D, ASN2C, ASN2D, ASN97C, ASN97D, ASP51D, ASP65C, ASP65D, ASP9C, ASP9D, GLN103C, GLN103D, GLN15C, GLN15D, GLN21C, GLN21D, GLN29C, GLN29D, GLN50C, GLN50D, GLN5C, GLN5D, GLN94C, GLN94D, GLN95C, GLN95D, GLU53C, GLU53D, GLU57C, GLU57D, GLU58D, GLU75C, GLU75D, GLU79C, GLU79D, GLU80C, GLU80D, GLU83C, GLU83D, GLU87C, GLU87D, GLU99C, GLU99D, GLY52C, GLY52D, GLY92C, GLY92D, HIS104C, HIS104D, HIS76C, HIS76D, ILE56C, ILE56D, ILE6C, ILE6D, ILE70C, ILE70D, ILE77C, ILE77D, ILE81C, ILE81D, ILE93C, ILE93D, LEU105C, LEU105D, LEU14C, LEU14D, LEU18C, LEU18D, LEU3C, LEU3D, LEU59D, LEU61D, LEU68C, LEU68D, LEU85C, LEU85D, LYS100C, LYS100D, LYS12C, LYS12D, LYS4C, LYS4D, LYS54D, LYS63C, LYS8C, LYS8D, MET108C, MET1C, MET71C, MET71D, MET88C, MET88D, MET98C, MET98D, PHE60C, PHE60D, PHE84C, PHE84D, PRO64C, PRO64D, PRO86C, PRO86D, SER16C, SER16D, THR10C, THR10D, THR13C, THR13D, THR19C, THR19D, THR25C, THR25D, THR72C, THR72D, THR91C, THR91D, TYR17C, TYR17D, TYR20C, TYR20D, TYR55D, VAL26C, VAL26D, VAL73C, VAL73D, VAL89C, VAL89D, VAL90C, VAL90D
• C-B: ALA337B, ALA46C, ARG24C, ARG300B, ARG436B, ASN2C, ASP335B, ASP51C, GLN21C, GLN50C, GLN5C, GLU465B, GLU467B, GLY330B, GLY334B, GLY47C, GLY52C, HIS42C, LEU14C, LEU23C, LYS12C, LYS331B, LYS336B, LYS463B, LYS48C, LYS4C, LYS54C, MET1C, MET469B, PHE464B, PHE466B, SER16C, SER45C, THR13C, THR19C, THR468B, TYR17C, TYR20C, VAL328B, VAL49C
• D-B: ALA28D, ALA38D, ALA46D, ARG24D, ARG300B, ASN43D, ASP457B, ASP51D, ASP9D, GLN15D, GLN21D, GLN29D, GLN50D, GLU32D, GLU461B, GLU465B, GLU467B, GLU53D, GLY31D, GLY330B, GLY377B, GLY378B, GLY401B, GLY405B, GLY47D, GLY52D, HIS380B, HIS383B, HIS42D, ILE462B, LEU14D, LEU18D, LEU23D, LEU27D, LEU39D, LEU41D, LEU458B, LYS12D, LYS331B, LYS460B, LYS463B, LYS48D, PHE44D, PHE464B, PHE466B, PRO35D, SER16D, SER45D, THR10D, THR13D, THR19D, THR327B, THR468B, TRP382B, TRP40D, TRP459B, TYR17D, TYR20D, TYR55D, VAL329B, VAL49D
• B-E: ARG128B, ASN2E, GLN42B, LEU3E, LYS125B, PRO43B
• B-F: ALA126B, ALA28F, ALA50B, ALA52B, ALA53B, ALA56B, ARG128B, ARG69F, ARG74F, ASN34F, ASP65F, GLN29F, GLN42B, GLU32F, GLU49B, GLU57B, GLU75F, GLU80F, GLY123B, GLY31F, GLY44B, GLY51B, GLY61B, HIS76F, ILE127B, ILE54B, ILE70F, ILE77F, LEU19B, LEU30F, LEU37F, LEU66F, LEU68F, LYS125B, LYS18B, PHE124B, PRO35F, PRO36F, PRO41B, PRO43B, PRO46B, THR20B, THR25F, THR33F, THR72F, TYR21B, VAL26F, VAL45B, VAL73F
• E-F: ALA11E, ALA11F, ALA22E, ALA22F, ALA28E, ALA28F, ALA67E, ALA67F, ALA78E, ALA78F, ALA7E, ALA7F, ALA82E, ALA82F, ALA96E, ALA96F, ARG101E, ARG101F, ARG102E, ARG102F, ARG107E, ARG24E, ARG24F, ARG69F, ARG74E, ARG74F, ASN2E, ASN2F, ASN97E, ASN97F, ASP51E, ASP51F, ASP65E, ASP65F, ASP9E, ASP9F, GLN103E, GLN103F, GLN15E, GLN15F, GLN21E, GLN21F, GLN29E, GLN29F, GLN5E, GLN5F, GLN94E, GLN94F, GLN95E, GLN95F, GLU53E, GLU53F, GLU57E, GLU57F, GLU58E, GLU58F, GLU75E, GLU75F, GLU79E, GLU79F, GLU80E, GLU80F, GLU83E, GLU83F, GLU87E, GLU87F, GLU99E, GLU99F, GLY52E, GLY52F, GLY92E, GLY92F, HIS104E, HIS104F, HIS76E, HIS76F, ILE56E, ILE56F, ILE6E, ILE6F, ILE70E, ILE70F, ILE77E, ILE77F, ILE81E, ILE81F, ILE93E, ILE93F, LEU105E, LEU105F, LEU14E, LEU14F, LEU18E, LEU18F, LEU3E, LEU3F, LEU59E, LEU59F, LEU68E, LEU68F, LEU85E, LEU85F, LYS100E, LYS100F, LYS12E, LYS12F, LYS4E, LYS4F, LYS54E, LYS54F, LYS63E, LYS8E, LYS8F, MET108E, MET71E, MET71F, MET88E, MET88F, MET98E, MET98F, PHE60E, PHE60F, PHE84E, PHE84F, PRO64E, PRO64F, PRO86E, PRO86F, SER16E, SER16F, THR10E, THR10F, THR13E, THR13F, THR19E, THR19F, THR25E, THR25F, THR72E, THR72F, THR91E, THR91F, TYR17E, TYR17F, TYR20E, TYR20F, TYR55E, TYR55F, VAL73E, VAL73F, VAL89E, VAL89F, VAL90E, VAL90F