3R6M

crystal structure of vibrio parahaemolyticus yeaz

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: B-C
  • Int. Res.: 91
  • Norm. En. per Res.: -2.2905
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-49.1625	33.2898	-133.234	-149.1067	94	17	2	7504	4	38	23
A-C	0.0	-4.692	-29.3003	-33.9923	31	0	1	1192	0	7	6
A-D	0.0	-0.8238	-201.947	-202.7708	90	9	7	9918	0	22	27
B-C	0.0	-0.1439	-208.295	-208.4389	91	10	7	9964	0	22	27
B-D	0.0	-4.788	-29.0506	-33.8386	31	0	1	1177	0	8	5

Interface residues

• A-B: ALA118A, ALA118B, ALA164A, ALA164B, ALA170A, ALA170B, ALA176A, ALA176B, ALA183A, ALA183B, ALA31A, ALA31B, ARG119A, ARG119B, ARG27A, ARG27B, ARG33A, ARG33B, ASN13A, ASN13B, ASP117A, ASP117B, ASP184A, ASP184B, ASP34A, ASP34B, GLN172A, GLN172B, GLU122A, GLU122B, GLU12A, GLU12B, GLU173A, GLU173B, GLU186A, GLU186B, GLU29A, GLU29B, GLY165A, GLY165B, GLY167A, GLY167B, GLY71A, GLY71B, HIS35A, HIS35B, ILE74A, ILE74B, LEU175A, LEU175B, LEU188A, LEU188B, LYS37A, LYS37B, LYS38A, LYS38B, MET120A, MET120B, PHE69A, PHE69B, PRO146A, PRO146B, PRO32A, PRO32B, SER121A, SER121B, SER169A, SER169B, SER185A, SER185B, SER68A, SER68B, THR11A, THR11B, THR163A, THR163B, THR166A, THR166B, THR182A, THR182B, THR70A, THR70B, TRP168A, TRP168B, TYR171A, TYR171B, TYR189A, TYR189B, VAL123A, VAL123B, VAL187A, VAL187B, VAL30A, VAL30B
• A-C: ALA148A, ALA151A, ALA176A, ARG119C, ARG149A, ARG149C, ARG73C, CYS143C, GLN155A, GLN172A, GLU122C, GLU152A, GLU173A, GLU174A, GLY177A, GLY67C, GLY71C, LEU175A, LEU178A, MET120C, PHE69C, PRO146A, PRO146C, PRO179A, SER121C, SER68C, THR70C, TRP168A, TYR124C, TYR171A, VAL144C
• A-D: ALA79A, ALA79D, ALA83A, ALA83D, ALA86A, ALA86D, ARG33A, ARG33D, ARG73A, ARG73D, ASP34A, ASP34D, ASP44A, ASP44D, GLN55A, GLN55D, GLN80A, GLN80D, GLU212A, GLU212D, GLU213A, GLU213D, GLU45A, GLU45D, GLU87A, GLU87D, GLY71A, GLY71D, GLY75A, GLY75D, GLY77A, GLY77D, GLY81A, GLY81D, GLY85A, GLY85D, HIS35A, HIS35D, ILE74A, ILE74D, ILE76A, ILE76D, ILE78A, ILE78D, LEU40A, LEU40D, LEU47A, LEU47D, LEU52A, LEU54A, LEU54D, LEU57A, LEU57D, LEU5A, LEU5D, LEU82A, LEU82D, LYS37A, LYS37D, LYS38A, LYS38D, LYS48A, LYS48D, MET42A, MET42D, MET90A, MET90D, PHE69A, PHE69D, PHE84A, PHE84D, PRO41A, PRO41D, SER68D, THR36A, THR36D, THR53A, THR53D, THR70A, THR70D, VAL211A, VAL211D, VAL39A, VAL39D, VAL43A, VAL43D, VAL46A, VAL46D, VAL72A, VAL72D
• B-C: ALA79B, ALA79C, ALA83B, ALA83C, ALA86B, ALA86C, ARG33B, ARG33C, ARG73B, ARG73C, ASP34B, ASP34C, ASP44B, ASP44C, GLN55B, GLN55C, GLN80B, GLN80C, GLU212B, GLU212C, GLU213B, GLU213C, GLU45B, GLU45C, GLU87B, GLU87C, GLY71B, GLY71C, GLY75B, GLY75C, GLY77B, GLY77C, GLY81B, GLY81C, GLY85B, GLY85C, HIS35B, HIS35C, ILE74B, ILE74C, ILE76B, ILE76C, ILE78B, ILE78C, LEU40B, LEU40C, LEU47B, LEU47C, LEU52B, LEU52C, LEU54B, LEU54C, LEU57B, LEU57C, LEU5B, LEU5C, LEU82B, LEU82C, LYS37B, LYS37C, LYS38B, LYS38C, LYS48B, LYS48C, MET42B, MET42C, MET90B, MET90C, PHE69B, PHE69C, PHE84B, PHE84C, PRO41B, PRO41C, SER68B, THR36B, THR36C, THR53B, THR53C, THR70B, THR70C, VAL211B, VAL211C, VAL39B, VAL39C, VAL43B, VAL43C, VAL46B, VAL46C, VAL72B, VAL72C
• B-D: ALA148B, ALA151B, ALA176B, ARG119D, ARG149B, ARG149D, ARG73D, CYS143D, GLN155B, GLN172B, GLU122D, GLU152B, GLU173B, GLU174B, GLY177B, GLY67D, GLY71D, LEU175B, LEU178B, MET120D, PHE69D, PRO146B, PRO146D, PRO179B, SER121D, SER68D, THR70D, TRP168B, TYR124D, TYR171B, VAL144D