3QQC

crystal structure of archaeal spt4/5 bound to the rnap clamp domain

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: D-E
  • Int. Res.: 78
  • Norm. En. per Res.: -4.2927
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-D	-14.9594	-8.6516	-157.207	-180.818	58	10	6	6411	1	13	15
A-E	0.0	0.0	-0.0007	-0.0007	2	0	0	2	0	0	0
D-E	-61.7246	-10.8976	-262.211	-334.8333	78	17	22	11130	2	30	24

Interface residues

• A-D: ALA322A, ALA324A, ALA7D, ARG311A, ARG315A, ARG41D, ARG9D, ASN314A, ASN319A, ASP331A, ASP334A, GLN318A, GLN326A, GLU15D, GLU321A, GLU330A, GLU73D, GLU78D, GLU80D, GLU85D, GLY13D, GLY323A, GLY44D, GLY72D, HIS12D, HIS81D, ILE312A, ILE320A, ILE328A, ILE329A, ILE46D, ILE5D, ILE79D, LEU316A, LEU327A, LEU332A, LEU335A, LEU37D, LEU70D, LYS317A, LYS43D, LYS77D, PHE47D, PHE6D, PHE82D, PRO325A, PRO39D, PRO71D, PRO75D, SER40D, THR11D, TRP333A, TYR45D, VAL10D, VAL42D, VAL69D, VAL74D, VAL8D
• A-E: ALA322A, ARG59E
• D-E: ALA19D, ALA35D, ALA38D, ALA45E, ALA50D, ALA57E, ARG27D, ARG41D, ARG59E, ASN41E, ASP32E, ASP38E, GLU15D, GLU16D, GLU3E, GLU40E, GLU43E, GLU49D, GLU78D, GLU80D, GLU84D, GLU85D, GLY49E, GLY54E, HIS10E, HIS81D, ILE12E, ILE22D, ILE33D, ILE35E, ILE36D, ILE36E, ILE44E, ILE46D, ILE48E, ILE58E, ILE5D, ILE79D, LEU21D, LEU31D, LEU33E, LEU37D, LEU83D, LYS20D, LYS43D, LYS46E, LYS47E, LYS4D, LYS55E, LYS77D, PHE31E, PHE47D, PHE6D, PHE76D, PHE82D, PRO32D, PRO39D, PRO51D, PRO53E, PRO75D, SER24D, SER40D, SER42E, THR17D, THR18D, THR28D, TRP30E, TYR11E, TYR23D, TYR34D, TYR56E, VAL26D, VAL34E, VAL37E, VAL39E, VAL42D, VAL48D, VAL60E