3QPB
crystal structure of streptococcus pyogenes uridine phosphorylase reveals a subclass of the np-i superfamily
Total interactions analyzed 153
Total true interactions 45
Strongest Interaction Chains K-M
Int. Res. 31
Norm. En. per Res. -3.6269
Hub Node A(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -128.2965 95.1393 -573.792 -606.9492 173 30 10 20722 10 76 72
A-C -48.1726 -26.6153 -325.605 -400.3929 118 5 14 13570 2 28 30
A-D -10.677 0.5345 -67.9501 -78.0926 27 1 1 2330 0 7 7
A-F -10.2181 0.1653 -68.1697 -78.2224 27 0 1 2332 0 7 7
A-I 0.0 0.0 -0.0047 -0.0047 3 0 0 5 0 0 0
B-C -10.654 -1.0218 -68.1521 -79.828 26 2 1 2350 0 7 7
B-E -11.2516 2.4376 -68.391 -77.205 26 3 1 2312 0 7 7
B-F -51.6178 -27.0713 -328.925 -407.6141 117 5 14 13588 2 28 30
B-G 0.0 14.7014 -23.8041 -9.1027 25 0 2 1396 0 8 8
C-D -124.8447 99.3943 -575.984 -601.4344 193 34 11 21791 9 77 70
C-E -9.9629 1.4715 -66.3523 -74.8437 26 3 1 2279 0 7 7
C-J 0.0 6.8357 -21.64 -14.8043 21 0 2 1285 0 5 6
D-E -50.5013 -28.0557 -329.319 -407.8761 118 5 14 13701 2 28 30
D-F -10.0258 0.0512 -67.3056 -77.2802 27 1 1 2313 0 7 7
D-K 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
E-F -122.0021 107.9114 -574.512 -588.6027 175 29 10 20783 10 76 71
E-L 0.0 8.3184 -21.2606 -12.9422 20 0 2 1258 0 5 6
F-H 0.0 0.0 -4.628 -4.628 8 0 0 255 0 1 1
G-H -126.6373 107.6877 -570.105 -589.0546 172 33 10 20781 10 76 70
G-I -48.0232 -27.459 -325.022 -400.5042 117 6 14 13591 2 28 30
G-J -11.9054 2.4389 -68.1145 -77.581 27 2 1 2256 0 7 7
G-L -10.6198 0.0863 -69.3848 -79.9182 27 1 1 2365 0 7 7
H-I -9.6113 -0.933 -67.5198 -78.0641 26 1 1 2302 0 7 7
H-K -10.0411 -0.1199 -66.5368 -76.6977 26 2 1 2312 0 7 7
H-L -46.2818 -27.237 -328.116 -401.6347 117 6 14 13670 2 28 30
I-J -119.9468 106.5367 -571.612 -585.0221 176 30 10 20834 10 76 71
I-K -9.8061 0.021 -67.9927 -77.7778 25 2 1 2330 0 7 7
J-K -42.1114 -25.7065 -327.257 -395.0749 117 6 14 13667 2 28 30
J-L -10.1897 0.2632 -66.9179 -76.8444 27 1 1 2298 0 7 7
J-M 0.0 0.0 -0.5167 -0.5167 10 0 0 67 0 3 4
K-L -123.6505 98.0633 -571.493 -597.0802 175 30 10 20760 10 76 70
K-M -15.8172 -59.6007 -37.016 -112.434 31 0 1 1520 8 20 19
K-O 0.0 0.0 -0.4898 -0.4898 10 0 0 67 0 5 5
M-N -93.592 114.2135 -537.887 -517.2655 173 23 10 19684 5 76 71
M-O -46.7793 -29.6142 -323.162 -399.5555 117 6 14 13487 2 29 30
M-P -11.5596 0.5866 -65.6454 -76.6184 27 1 1 2307 0 7 7
M-R -11.9285 0.1166 -66.1432 -77.9552 27 1 1 2335 0 7 7
N-O -12.2562 5.3952 -65.4426 -72.3036 26 3 1 2338 0 7 7
N-Q -10.6416 -0.6961 -65.7448 -77.0826 26 2 1 2265 0 7 7
N-R -48.7556 -28.6557 -324.984 -402.3953 118 6 14 13561 2 28 30
O-P -104.7094 107.9377 -550.006 -546.7778 170 29 10 20388 10 76 71
O-Q -10.661 1.3168 -68.0453 -77.3895 26 2 1 2355 0 7 7
P-Q -52.3503 -28.1223 -327.457 -407.9296 117 6 14 13630 2 29 30
P-R -11.1998 -1.0629 -63.5668 -75.8295 25 1 1 2252 0 7 7
Q-R -106.0764 89.6399 -547.836 -564.2724 173 30 10 20416 10 75 68