3Q23

x-ray crystal structure of the n4 mini-vrnap and p2_7a promoter transcription initiation complex with gmpcpp and manganese: sustrate complex ii

• Total interactions analyzed: 6
• Total true interactions: 1
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 133
  • Norm. En. per Res.: -0.57
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-25.4953	168.9443	-219.261	-75.812	133	9	1	8216	4	76	91

Interface residues

• A-B: ALA100A, ALA100B, ALA108A, ALA108B, ALA244A, ALA244B, ALA245A, ALA245B, ALA515A, ALA515B, ALA709B, ARG104A, ARG104B, ARG106A, ARG106B, ARG163A, ARG357A, ARG357B, ARG402A, ARG88A, ARG88B, ARG902B, ASN112A, ASN112B, ASN255A, ASN255B, ASN514A, ASN514B, ASP101A, ASP101B, ASP141A, ASP141B, ASP143A, ASP143B, ASP251A, ASP251B, ASP279A, ASP279B, ASP356A, ASP356B, ASP517A, ASP517B, GLN153A, GLN153B, GLN196B, GLU149A, GLU149B, GLU248A, GLU248B, GLU254A, GLU254B, GLU277B, GLU360A, GLU360B, GLU370B, GLU513A, GLU513B, GLU84A, GLU91A, GLU91B, GLU94A, GLU94B, GLU97A, GLU97B, GLY142A, GLY142B, GLY96A, GLY96B, GLY98A, GLY98B, HIS95A, HIS95B, ILE102A, ILE102B, ILE256B, ILE99A, ILE99B, LEU103A, LEU103B, LEU107B, LEU152A, LEU152B, LEU160A, LEU272B, LEU278A, LEU55A, LEU55B, LEU92A, LEU92B, LYS109A, LYS109B, LYS118A, LYS118B, LYS146A, LYS146B, LYS369B, LYS378B, LYS56A, LYS56B, LYS710B, LYS87A, LYS87B, LYS90A, MET93A, MET93B, PHE246A, PHE246B, PHE281A, PRO512A, PRO512B, SER105A, SER105B, SER249A, SER249B, THR144A, THR144B, THR250A, THR250B, THR274B, THR276A, THR276B, THR507A, THR508A, TYR147A, VAL247A, VAL247B, VAL252A, VAL252B, VAL253A, VAL253B, VAL257B, VAL516A, VAL516B