3PYQ
crystal structure of a complex containing domain 3 from the psiv igr ires rna bound to the 70s ribosome. this file contains the 30s subunit of the second 70s ribosome.
Total interactions analyzed 231
Total true interactions 24
Strongest Interaction Chains J-N
Int. Res. 56
Norm. En. per Res. -4.4822
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0993 -0.0993 5 0 0 41 0 1 2
B-E 0.0 0.0 -0.6816 -0.6816 6 0 0 99 0 0 2
B-H -2.3523 -48.7027 -63.4395 -114.4945 35 5 0 2530 2 15 17
C-D 0.0 0.0 -0.1919 -0.1919 4 0 0 56 0 0 7
C-E 0.0 -16.3765 -20.0634 -36.4399 17 1 0 867 0 4 4
C-J 0.0 -0.0696 -76.5862 -76.6558 54 4 2 3581 0 16 26
C-N 0.0 12.6679 -218.335 -205.667 80 13 2 9106 0 19 39
D-E -6.2517 4.2419 -70.5853 -72.5951 52 3 0 3202 1 9 12
E-H -2.0968 -22.3555 -106.971 -131.4232 63 9 2 5855 2 41 42
F-O 0.0 0.0 -2.9712 -2.9712 5 0 0 143 0 3 2
F-R -37.1072 -10.8916 -239.638 -287.6367 83 27 9 9682 0 13 21
G-I -8.9066 9.4148 -36.5637 -36.0555 37 1 5 2182 0 4 8
G-K 0.0 0.0 -65.8574 -65.8574 29 6 3 2454 0 2 6
H-L 0.0 0.0 -12.3063 -12.3063 11 1 0 561 0 0 1
H-Q -3.7028 4.7286 -28.0252 -26.9994 14 0 0 1260 0 2 8
I-J 0.0 -2.1413 -31.6658 -33.8071 19 8 0 1238 0 8 17
I-N 0.0 0.0 -14.5877 -14.5877 9 0 0 528 0 0 0
J-N -34.526 -16.3478 -200.128 -251.0018 56 14 5 8214 2 16 33
K-R -18.3596 -15.2501 -68.6015 -102.2112 34 5 1 3345 1 13 18
L-Q 0.0 0.0 -39.3871 -39.3871 20 0 4 2141 0 0 8
M-S -4.0805 40.6181 -114.659 -78.1214 50 13 1 4541 0 9 19
M-U 0.0 0.9999 -2.4676 -1.4677 13 0 0 364 0 3 9
N-S 0.0 0.0 -0.0025 -0.0025 2 0 0 2 0 0 0
O-Q 0.0 -1.1532 -0.5476 -1.7008 13 0 0 179 0 8 6