3PYN
crystal structure of a complex containing domain 3 from the psiv igr ires rna bound to the 70s ribosome. this file contains the 30s subunit of the first 70s ribosome.
Total interactions analyzed 231
Total true interactions 24
Strongest Interaction Chains J-N
Int. Res. 56
Norm. En. per Res. -4.4234
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0995 -0.0995 5 0 0 41 0 1 2
B-E 0.0 0.0 -0.6807 -0.6807 4 0 0 97 0 0 2
B-H -2.3319 -48.8588 -63.5001 -114.6908 35 5 0 2528 2 15 17
C-D 0.0 0.0 -0.192 -0.192 4 0 0 56 0 0 7
C-E 0.0 -16.2584 -19.9707 -36.2291 17 1 0 865 0 4 4
C-J 0.0 -0.0952 -76.3256 -76.4208 56 4 2 3599 0 16 26
C-N 0.0 12.6531 -214.836 -202.1829 80 15 2 9094 0 19 39
D-E -6.1756 4.2105 -70.7185 -72.6836 52 3 0 3207 1 9 12
E-H -2.0958 -21.8519 -106.492 -130.4397 63 9 2 5848 2 41 42
F-O 0.0 0.0 -2.6725 -2.6725 5 2 0 150 0 3 2
F-R -34.5725 -10.9253 -238.076 -283.5738 83 29 9 9688 0 13 21
G-I -8.8953 9.5055 -36.7918 -36.1816 37 1 5 2178 0 4 8
G-K 0.0 0.0 -63.8022 -63.8022 29 5 3 2419 0 2 6
H-L 0.0 0.0 -12.2315 -12.2315 11 1 0 559 0 0 1
H-Q -3.5811 4.7199 -28.0494 -26.9106 14 0 0 1255 0 2 8
I-J 0.0 -2.142 -31.9043 -34.0463 19 8 0 1260 0 8 17
I-N 0.0 0.0 -14.6634 -14.6634 9 0 0 531 0 0 0
J-N -31.8785 -16.3017 -199.532 -247.7122 56 16 5 8220 2 16 33
K-R -18.4725 -15.3641 -68.7224 -102.559 34 5 1 3350 1 13 18
L-Q 0.0 0.0 -40.2167 -40.2167 22 0 4 2163 0 0 8
M-S -4.149 40.5906 -114.188 -77.7464 50 15 1 4536 0 9 19
M-U 0.0 1.0001 -2.5295 -1.5294 13 0 0 371 0 3 9
N-S 0.0 0.0 -0.0025 -0.0025 2 0 0 2 0 0 0
O-Q 0.0 -1.1536 -0.547 -1.7006 13 0 0 178 0 8 6