3PWJ

human class i mhc hla-a2 in complex with the hud (g2l,i9v) peptide variant

• Total interactions analyzed: 15
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 128
  • Norm. En. per Res.: -4.2612
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-57.5409	-97.0254	-390.862	-545.4283	128	9	2	13460	4	47	42
A-C	-33.9125	0.0	-288.757	-322.6695	88	10	7	9951	0	0	0
A-D	-3.8895	-10.1963	-132.957	-147.0428	71	10	0	4995	1	33	36
D-E	-47.3935	-91.0455	-377.035	-515.474	127	5	2	13237	4	45	40
D-F	-41.9588	0.0	-319.428	-361.3868	90	9	6	10563	0	0	0

Interface residues

• A-B: ALA117A, ALA125A, ALA15B, ALA236A, ALA246A, ALA24A, ARG111A, ARG12B, ARG14A, ARG17A, ARG202A, ARG21A, ARG234A, ARG35A, ARG3B, ARG48A, ARG6A, ARG97A, ARG97B, ASN21B, ASN24B, ASP102A, ASP119A, ASP122A, ASP238A, ASP30A, ASP34B, ASP37A, ASP53B, ASP59B, ASP96B, ASP98B, CYS25B, GLN115A, GLN242A, GLN2B, GLN32A, GLN87A, GLN8B, GLN96A, GLU229A, GLU232A, GLU46A, GLU50B, GLY120A, GLY237A, GLY239A, GLY26A, GLY29B, GLY91A, HIS114A, HIS13B, HIS188A, HIS191A, HIS192A, HIS31B, HIS51B, HIS93A, ILE124A, ILE1B, ILE23A, ILE35B, ILE7B, LEU206A, LEU230A, LEU54B, LEU64B, LEU65B, LYS121A, LYS186A, LYS243A, LYS58B, LYS6B, MET0B, MET98A, MET99B, PHE22A, PHE22B, PHE241A, PHE30B, PHE36A, PHE56B, PHE62B, PHE8A, PHE9A, PRO14B, PRO235A, PRO32B, SER11A, SER11B, SER13A, SER207A, SER28B, SER33B, SER52B, SER55B, SER57B, SER61B, SER92A, THR10A, THR190A, THR200A, THR233A, THR240A, THR94A, TRP204A, TRP244A, TRP60B, TRP95B, TYR10B, TYR113A, TYR116A, TYR118A, TYR123A, TYR26B, TYR27A, TYR63B, TYR66B, TYR67B, TYR7A, TYR99A, VAL12A, VAL231A, VAL25A, VAL27B, VAL34A, VAL95A, VAL9B
• A-C: ALA117A, ALA139A, ALA140A, ALA150A, ALA153A, ALA158A, ALA24A, ALA69A, ARG157A, ARG170A, ARG65A, ARG6A, ARG75A, ARG82A, ARG97A, ASN7C, ASP77A, CYS101A, CYS164A, GLN155A, GLN72A, GLU154A, GLU166A, GLU55A, GLU58A, GLU63A, GLY100A, GLY26A, GLY4C, GLY62A, GLY79A, HIS114A, HIS151A, HIS70A, HIS74A, ILE124A, ILE52A, LEU156A, LEU160A, LEU168A, LEU1C, LEU2C, LEU78A, LEU81A, LYS144A, LYS146A, LYS66A, LYS68A, MET45A, MET5A, PHE22A, PHE33A, PHE36A, PHE5C, PHE8A, PHE9A, SER71A, THR142A, THR143A, THR163A, THR64A, THR73A, THR80A, TRP133A, TRP147A, TRP167A, TRP51A, TYR116A, TYR118A, TYR123A, TYR159A, TYR171A, TYR3C, TYR59A, TYR7A, TYR84A, TYR85A, TYR8C, TYR99A, VAL152A, VAL25A, VAL28A, VAL34A, VAL67A, VAL6C, VAL76A, VAL95A, VAL9C
• A-D: ALA149D, ALA150D, ALA153D, ALA158D, ALA184A, ARG108A, ARG108D, ARG111D, ARG131D, ARG157D, ARG169A, ARG169D, ARG170A, ARG170D, ARG181A, ASN174A, ASN174D, ASP106A, ASP106D, ASP129D, ASP183A, GLN155D, GLN180A, GLN180D, GLU128D, GLU148D, GLU154D, GLU161D, GLU166A, GLU166D, GLU173A, GLU173D, GLU264A, GLY104A, GLY104D, GLY162D, GLY1A, GLY265A, HIS151D, HIS263A, HIS3A, LEU110D, LEU130D, LEU156D, LEU168A, LEU172A, LEU172D, LEU266A, LYS176A, LYS176D, LYS186A, LYS268A, PHE109A, PHE109D, PHE208A, PRO185A, PRO267A, PRO269A, SER105A, SER105D, THR163D, THR182A, TRP107A, TRP107D, TYR159D, TYR209A, VAL103A, VAL103D, VAL152D, VAL165A, VAL165D
• D-E: ALA117D, ALA125D, ALA236D, ALA246D, ALA24D, ARG111D, ARG12E, ARG14D, ARG17D, ARG202D, ARG21D, ARG234D, ARG35D, ARG3E, ARG48D, ARG6D, ARG97D, ARG97E, ASN21E, ASN24E, ASP102D, ASP119D, ASP122D, ASP238D, ASP30D, ASP34E, ASP37D, ASP53E, ASP59E, ASP96E, ASP98E, CYS25E, GLN115D, GLN242D, GLN2E, GLN32D, GLN87D, GLN8E, GLN96D, GLU229D, GLU232D, GLU46D, GLU50E, GLY120D, GLY237D, GLY239D, GLY26D, GLY29E, GLY91D, HIS114D, HIS13E, HIS188D, HIS191D, HIS192D, HIS31E, HIS51E, HIS93D, ILE124D, ILE1E, ILE23D, ILE7E, LEU206D, LEU54E, LEU64E, LEU65E, LYS121D, LYS186D, LYS243D, LYS58E, LYS6E, MET0E, MET98D, MET99E, PHE22D, PHE22E, PHE241D, PHE30E, PHE36D, PHE56E, PHE62E, PHE8D, PHE9D, PRO14E, PRO235D, PRO32E, PRO47D, SER11D, SER11E, SER13D, SER207D, SER28E, SER33E, SER4D, SER52E, SER55E, SER57E, SER61E, SER92D, THR10D, THR190D, THR200D, THR233D, THR240D, THR94D, TRP204D, TRP244D, TRP60E, TRP95E, TYR10E, TYR113D, TYR116D, TYR118D, TYR123D, TYR26E, TYR27D, TYR63E, TYR66E, TYR67E, TYR7D, TYR99D, VAL12D, VAL231D, VAL25D, VAL27E, VAL34D, VAL95D, VAL9E
• D-F: ALA117D, ALA139D, ALA140D, ALA150D, ALA153D, ALA158D, ALA24D, ALA69D, ARG157D, ARG170D, ARG65D, ARG6D, ARG75D, ARG82D, ARG97D, ASN7F, ASP77D, CYS164D, GLN115D, GLN155D, GLN72D, GLU154D, GLU166D, GLU55D, GLU58D, GLU63D, GLY100D, GLY26D, GLY4F, GLY62D, GLY79D, HIS114D, HIS70D, HIS74D, ILE124D, ILE52D, LEU126D, LEU156D, LEU160D, LEU168D, LEU1F, LEU2F, LEU78D, LEU81D, LYS144D, LYS146D, LYS66D, LYS68D, MET45D, MET5D, MET98D, PHE22D, PHE33D, PHE36D, PHE5F, PHE8D, PHE9D, SER71D, THR142D, THR143D, THR163D, THR64D, THR73D, THR80D, TRP133D, TRP147D, TRP167D, TRP51D, TYR113D, TYR116D, TYR118D, TYR123D, TYR159D, TYR171D, TYR3F, TYR59D, TYR7D, TYR84D, TYR85D, TYR8F, TYR99D, VAL152D, VAL25D, VAL28D, VAL34D, VAL67D, VAL6F, VAL76D, VAL95D, VAL9F