3PCM
structure of protocatechuate 3,4-dioxygenase complexed with 6- hydroxynicotinic acid n-oxide and cyanide
Total interactions analyzed 66
Total true interactions 35
Strongest Interaction Chains E-Q
Int. Res. 273
Norm. En. per Res. -5.0962
Hub Node M(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M -216.9154 -67.7181 -1075.22 -1359.8535 273 61 25 42061 14 61 58
A-B -4.4734 1.9093 -28.9838 -31.5479 19 2 0 949 3 7 6
A-N -11.7827 0.0 -6.1544 -17.9371 7 0 0 143 0 2 1
A-C -4.6733 1.2057 -25.3096 -28.7772 17 2 0 909 3 7 6
A-O 0.0 -5.1553 -19.78 -24.9353 28 1 0 896 0 7 4
M-B 0.0 -5.0886 -18.8615 -23.9501 27 0 0 843 0 7 4
M-N -12.3517 0.0 -62.0206 -74.3723 42 4 1 2667 1 8 10
M-C -5.9643 0.0 -4.5347 -10.499 7 0 0 126 0 2 1
M-O -25.0727 -14.2317 -65.2313 -104.5357 40 4 1 2785 1 8 10
M-P -31.2321 3.2469 -392.708 -420.6932 141 12 4 16082 0 26 24
M-E -15.0064 2.4989 -58.4571 -70.9646 21 3 0 2010 0 2 3
M-Q -19.4717 6.9502 -90.4144 -102.9359 48 3 1 3253 0 17 13
B-N -233.0298 -62.3663 -1080.44 -1375.8361 274 61 25 42161 15 61 58
B-C -6.3141 2.0178 -29.6495 -33.9457 18 1 0 994 3 7 6
B-O -13.6126 0.0 -6.8982 -20.5108 8 1 0 159 0 2 1
B-P -8.9868 0.0 -51.6922 -60.679 20 5 0 2010 0 2 3
N-C 0.0 -4.9337 -18.2501 -23.1837 29 3 0 894 0 7 4
N-O -28.5754 -1.0609 -63.9486 -93.5848 43 7 1 2755 1 7 9
N-P -14.9309 6.9994 -86.5587 -94.4901 49 4 1 3230 0 17 13
C-O -235.8164 -66.396 -1075.71 -1377.9224 271 61 25 41971 14 62 58
D-P -217.6786 -102.2045 -1061.2 -1381.0831 273 64 25 42055 15 60 58
D-E -6.424 2.2087 -25.9955 -30.2109 18 2 0 959 3 7 6
D-Q -11.7803 0.0 -4.0251 -15.8054 8 1 0 143 0 2 1
D-F -6.7023 1.1847 -28.1095 -33.627 18 1 0 942 3 7 7
D-R 0.0 -5.4555 -20.2777 -25.7332 30 1 0 907 0 7 4
P-E 0.0 -4.8702 -19.8355 -24.7057 29 1 0 872 0 7 4
P-Q -12.4301 0.0 -60.4623 -72.8924 40 5 1 2723 1 8 10
P-F -9.6705 0.0 -6.3325 -16.0029 7 0 0 143 0 2 1
P-R -27.2231 -11.0147 -62.2859 -100.5237 41 3 1 2779 1 8 10
E-Q -256.1121 -60.3595 -1074.8 -1391.2716 273 67 25 42023 15 60 58
E-F -4.9866 1.8533 -28.4183 -31.5516 17 1 0 918 3 7 6
E-R -2.9964 0.0 -5.2822 -8.2786 7 0 0 124 0 2 1
Q-F 0.0 -5.039 -16.9258 -21.9648 29 0 0 865 0 7 4
Q-R -20.9967 0.0 -64.2086 -85.2053 41 4 1 2727 1 8 9
F-R -243.6274 -56.3441 -1062.44 -1362.4115 274 59 25 41787 13 61 58