3PCB
structure of protocatechuate 3,4-dioxygenase complexed with 3- hydroxybenzoate
Total interactions analyzed 66
Total true interactions 35
Strongest Interaction Chains C-O
Int. Res. 270
Norm. En. per Res. -5.075
Hub Node M(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M -233.5825 -70.1632 -1073.22 -1376.9657 273 61 25 41509 16 59 58
A-B -4.3235 1.0461 -26.1387 -29.416 18 0 0 862 3 7 6
A-N -7.3942 0.0 -5.7766 -13.1708 7 1 0 145 0 1 1
A-C -4.5967 0.8262 -26.5417 -30.3122 15 2 0 846 2 7 6
A-O 0.0 -4.8621 -20.7591 -25.6212 27 2 0 897 0 7 4
M-B 0.0 -5.1099 -19.5635 -24.6734 29 0 0 873 0 7 4
M-N -18.8675 -17.5106 -57.6807 -94.0588 41 4 1 2716 2 8 10
M-C -5.4992 0.0 -5.3144 -10.8136 7 0 0 131 0 2 1
M-O -32.2566 -12.7523 -64.2309 -109.2397 42 4 1 2771 1 8 10
M-P -35.6241 2.1443 -398.966 -432.4459 139 16 4 16048 0 26 24
M-E -16.7784 1.3747 -61.219 -76.6228 22 2 1 2072 0 2 3
M-Q -17.7451 6.9586 -88.6922 -99.4787 49 2 1 3276 0 17 13
B-N -226.8706 -61.7858 -1070.47 -1359.1264 274 56 25 41632 16 59 58
B-C -4.5274 1.8982 -24.4683 -27.0975 17 2 0 895 3 7 6
B-O -13.5865 0.0 -5.7545 -19.341 7 1 0 152 0 2 1
B-P -15.0434 4.2731 -56.3796 -67.15 21 2 0 2042 0 2 3
N-C 0.0 -4.811 -21.0056 -25.8166 27 1 0 905 0 7 4
N-O -21.215 -11.3575 -63.2739 -95.8464 44 4 1 2817 1 8 9
N-P -16.2259 6.3051 -88.6405 -98.5612 48 2 1 3208 0 17 13
C-O -247.4519 -69.5605 -1053.24 -1370.2524 270 51 25 41460 15 59 59
D-P -223.8413 -69.293 -1061.09 -1354.2243 273 46 25 41334 15 60 58
D-E -3.7483 1.0234 -24.2146 -26.9395 15 2 0 854 3 7 6
D-Q -14.4115 0.0 -5.8565 -20.268 8 0 0 144 0 2 1
D-F -4.8131 0.8944 -24.4606 -28.3793 18 1 0 890 3 7 6
D-R 0.0 -4.6916 -21.4345 -26.1261 29 1 0 887 0 7 4
P-E 0.0 -4.9124 -19.1519 -24.0643 27 0 0 873 0 7 4
P-Q -19.7534 -9.8149 -61.9253 -91.4936 41 3 1 2770 1 8 10
P-F -11.1251 0.0 -5.9747 -17.0998 6 0 0 134 0 2 1
P-R -19.4755 -10.2294 -62.6267 -92.3316 43 5 1 2794 1 8 10
E-Q -225.4803 -70.0716 -1033.19 -1328.7419 274 64 25 41326 16 60 58
E-F -4.889 0.8507 -26.1487 -30.187 16 2 0 837 4 7 6
E-R -14.4272 0.0 -5.2115 -19.6387 7 1 0 130 0 2 1
Q-F 0.0 -4.6726 -20.7714 -25.444 27 1 0 896 0 7 4
Q-R -22.4724 -12.0844 -64.5598 -99.1166 41 3 1 2779 1 8 10
F-R -231.5604 -64.4578 -1058.52 -1354.5382 272 54 25 41321 15 59 58