3PCA
structure of protocatechuate 3,4-dioxygenase complexed with 3,4- dihydroxybenzoate
Total interactions analyzed 66
Total true interactions 35
Strongest Interaction Chains D-P
Int. Res. 272
Norm. En. per Res. -5.1512
Hub Node M(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M -218.0564 -68.0844 -1106.42 -1392.5608 274 53 25 42242 15 62 58
A-B -4.7922 1.1666 -27.0967 -30.7223 19 3 0 936 4 7 6
A-N -11.3905 0.0 -5.9894 -17.38 7 0 0 141 0 2 1
A-C -6.1874 1.3245 -24.9478 -29.8107 19 7 0 950 4 7 6
A-O 0.0 -5.1589 -20.666 -25.8249 29 0 0 916 0 7 4
M-B 0.0 -6.0351 -20.6792 -26.7142 28 0 0 882 0 7 4
M-N -15.4766 -13.4803 -56.3411 -85.298 41 5 1 2882 1 8 10
M-C -12.701 0.0 -6.2885 -18.9895 7 1 0 140 0 2 1
M-O -23.906 -10.3803 -68.4573 -102.7436 40 5 1 2905 1 8 10
M-P -35.9437 2.1791 -404.98 -438.7446 140 17 4 16320 0 26 24
M-E -15.5374 1.4409 -64.2347 -78.3313 24 2 1 2134 0 2 3
M-Q -13.5303 7.2366 -88.6249 -94.9185 49 2 1 3297 0 18 14
B-N -225.7826 -68.9366 -1090.22 -1384.9391 274 63 25 42169 15 59 58
B-C -5.871 1.3121 -26.1541 -30.713 18 4 0 953 3 7 6
B-O -14.1835 0.0 -5.9447 -20.1282 8 1 0 158 0 2 1
B-P -16.5552 3.768 -57.1432 -69.9304 23 5 1 2049 0 2 3
N-C 0.0 -5.0876 -21.4798 -26.5674 29 0 0 942 0 7 4
N-O -22.9513 -12.4953 -69.9087 -105.3553 41 4 1 2978 1 8 10
N-P -20.2077 6.5547 -87.0258 -100.6789 49 4 1 3254 0 17 13
C-O -229.3731 -64.2317 -1089.77 -1383.3747 273 61 25 42315 14 61 58
D-P -237.9882 -64.2933 -1098.84 -1401.1214 272 55 26 42308 15 60 58
D-E -4.2467 1.9069 -24.2371 -26.5769 18 2 0 925 4 7 6
D-Q -14.7042 0.0 -5.4637 -20.1679 8 1 0 157 0 2 1
D-F -4.2851 1.095 -28.2126 -31.4027 19 0 0 939 4 7 7
D-R 0.0 -4.9934 -21.2084 -26.2018 29 1 0 923 0 7 4
P-E 0.0 -5.1066 -20.6854 -25.792 27 0 0 910 0 7 4
P-Q -25.5611 -11.7157 -66.6035 -103.8804 40 3 1 2933 1 8 10
P-F -11.0957 0.0 -6.1083 -17.204 7 0 0 145 0 2 1
P-R -19.2512 -11.7415 -66.8077 -97.8004 41 5 1 2950 1 8 10
E-Q -228.1894 -64.077 -1076.84 -1369.1063 274 64 25 42052 15 60 59
E-F -4.5561 1.8231 -24.9246 -27.6576 19 1 0 934 4 7 6
E-R -15.8565 0.0 -4.3687 -20.2252 8 2 0 152 0 2 1
Q-F 0.0 -4.9863 -21.0406 -26.0269 28 1 0 915 0 7 4
Q-R -24.3427 -14.2668 -63.1248 -101.7343 41 9 1 2911 2 8 10
F-R -233.3338 -66.2887 -1063.13 -1362.7525 273 66 25 42162 14 61 58