3OK4

crystal structure of the ana:rna decamer suffering from lattice translocation defects

• Total interactions analyzed: 435
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-G
  • Int. Res.: 8
  • Norm. En. per Res.: -247.4487
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-C	0.0	0.0	21616.9	21616.9	8	2006	0	8041	0	0	0
A-G	0.0	0.0	-1979.59	-1979.59	8	0	0	11653	0	0	0
A-U	0.0	0.0	20654.0	20654.0	8	1562	0	7726	0	0	0
C-G	0.0	0.0	101227.0	101227.0	8	1996	0	13293	0	0	0
C-U	0.0	0.0	77161.5	77161.5	8	932	0	5912	0	0	0
G-U	0.0	0.0	-390.278	-390.278	8	0	0	4486	0	0	0

Interface residues

• A-C: B0A0A, B0C0C, E0A0A, E0C0C, E2A2A, E2C2C, E4A4A, E4C4C
• A-G: B0A0A, B0G0G, E0A0A, E0G0G, E2A2A, E2G2G, E4A4A, E4G4G
• A-U: B0A0A, B0U0U, E0A0A, E0U0U, E2A2A, E2U2U, E4A4A, E4U4U
• C-G: B0C0C, B0G0G, E0C0C, E0G0G, E2C2C, E2G2G, E4C4C, E4G4G
• C-U: B0C0C, B0U0U, E0C0C, E0U0U, E2C2C, E2U2U, E4C4C, E4U4U
• G-U: B0G0G, B0U0U, E0G0G, E0U0U, E2G2G, E2U2U, E4G4G, E4U4U