3OI0
structure of the thermus thermophilus 70s ribosome complexed with azithromycin. this file contains the 30s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes.
Total interactions analyzed 210
Total true interactions 25
Strongest Interaction Chains J-N
Int. Res. 55
Norm. En. per Res. -5.4061
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0194 -0.0194 4 0 0 15 0 1 1
B-E 0.0 0.0 -0.1051 -0.1051 7 0 0 44 0 1 2
B-H -8.1469 -35.433 -57.23 -100.8098 33 9 0 2645 2 17 15
C-D 0.0 0.0 -1.1831 -1.1831 6 0 0 162 0 0 7
C-E 0.0 -22.4847 -8.2219 -30.7066 13 1 0 556 0 4 5
C-J -6.13 3.8776 -70.927 -73.1795 57 1 2 3261 0 15 28
C-N 0.0 13.4044 -209.382 -195.9776 75 9 3 8706 0 19 37
D-E 0.0 -32.6511 -53.6949 -86.346 47 7 0 2574 4 5 9
E-H -9.4168 -48.1556 -115.154 -172.7265 62 6 2 5587 4 41 42
F-O 0.0 0.0 -2.8464 -2.8464 4 0 0 163 0 3 3
F-R -57.8554 -38.5297 -224.76 -321.1451 84 37 11 10101 2 13 20
G-I 0.0 2.3475 -31.0296 -28.6821 38 6 4 2267 0 5 9
G-K 0.0 0.0 -60.961 -60.961 29 9 4 2559 0 2 6
G-U 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 0 0
H-L 0.0 0.0 -7.8873 -7.8873 10 0 0 450 0 0 1
H-Q 0.0 4.5201 -26.097 -21.577 14 2 0 1207 0 2 8
I-J 0.0 -1.725 -27.0545 -28.7795 18 8 0 1203 0 9 15
I-N 0.0 0.0 -16.0681 -16.0681 9 0 0 520 0 0 0
J-N -30.1618 -41.0194 -226.155 -297.3362 55 23 6 8761 3 16 34
K-R -12.0992 -18.8446 -67.2996 -98.2434 28 11 3 2913 2 14 17
L-Q 0.0 0.0 -51.409 -51.409 23 3 4 2266 0 0 8
M-S 0.0 16.7521 -88.0498 -71.2977 44 4 3 3848 0 10 19
M-U 0.0 0.8335 -2.996 -2.1625 12 0 0 382 0 4 10
N-S 0.0 0.0 -0.1127 -0.1127 3 0 0 32 0 0 0
O-Q 0.0 0.0 -0.4082 -0.4082 10 0 0 98 0 7 6