3OHJ
structure of the thermus thermophilus ribosome complexed with erythromycin. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes.
Total interactions analyzed 435
Total true interactions 28
Strongest Interaction Chains O-T
Int. Res. 80
Norm. En. per Res. -3.3133
Hub Node E(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
0-8 0.0 0.0 -0.0019 -0.0019 2 0 0 2 0 1 2
0-Q 0.0 0.0 -30.5891 -30.5891 21 1 0 1376 0 3 10
0-S 0.0 -5.8981 -6.1057 -12.0038 16 1 0 257 0 8 10
1-I -4.7463 0.0 -38.7313 -43.4776 30 2 1 1734 0 7 7
2-X -14.2186 21.9005 -106.233 -98.5511 46 18 1 5096 2 19 19
2-Y 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
4-G 0.0 0.0 -109.526 -109.526 72 19 3 5351 0 19 23
5-R 0.0 11.621 -61.2692 -49.6482 33 0 3 2974 0 7 14
5-U 0.0 1.3333 -3.3835 -2.0502 12 0 0 469 0 0 8
5-W 0.0 34.1748 -98.7469 -64.5721 51 4 4 4649 0 10 20
6-8 0.0 0.4974 -18.4736 -17.9762 17 5 0 1218 0 7 4
7-F 0.0 0.0 -0.0022 -0.0022 3 0 0 3 0 0 0
7-X 0.0 0.0 -1.7994 -1.7994 9 0 0 159 0 0 8
8-P -6.1483 11.8212 -171.656 -165.9831 58 31 0 8615 1 16 62
E-N 0.0 0.0 -29.3164 -29.3164 11 5 0 981 0 0 1
E-O -11.4955 2.0505 -30.1444 -39.5894 15 2 0 1087 0 9 8
E-R 0.0 1.5763 -45.2129 -43.6365 16 12 0 2404 0 1 13
E-T 0.0 -16.4512 -118.11 -134.5612 73 3 6 6736 1 20 18
F-P 0.0 17.1283 -87.5901 -70.4618 43 5 0 4354 0 19 22
F-U 0.0 0.0 -0.942 -0.942 9 0 0 252 0 0 2
N-U -33.9492 -5.3131 -94.299 -133.5613 47 22 1 4781 0 8 24
N-V 0.0 0.0 -22.7137 -22.7137 15 3 0 1411 0 2 5
O-T -41.2066 -6.4905 -217.363 -265.0601 80 28 5 9764 3 41 40
P-U 0.0 0.0 -0.001 -0.001 4 0 0 3 0 0 1
P-V 0.0 5.6179 -9.6815 -4.0636 10 1 1 532 0 0 8
Q-Z -61.2885 -27.9292 -310.417 -399.6347 123 57 6 12931 8 47 55
R-W -2.863 -25.6574 -17.062 -45.5823 18 4 0 805 2 5 9
U-V -28.1794 13.7424 -201.711 -216.148 97 54 7 10762 1 20 50