3OHC
structure of the thermus thermophilus ribosome complexed with erythromycin. this file contains the 30s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes.
Total interactions analyzed 210
Total true interactions 24
Strongest Interaction Chains J-N
Int. Res. 55
Norm. En. per Res. -5.6279
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.3179 -0.3179 6 0 0 69 0 3 4
B-E 0.0 0.0 -0.1784 -0.1784 8 0 0 79 0 0 2
B-H -10.1645 -36.057 -68.1568 -114.3783 33 6 0 2726 2 17 17
C-D 0.0 0.0 -0.5592 -0.5592 7 0 0 110 0 0 7
C-E 0.0 -23.2503 -9.7697 -33.02 14 1 0 571 1 4 5
C-J 0.0 5.9462 -62.4354 -56.4892 54 0 1 3031 0 14 28
C-N -3.0606 10.8509 -219.898 -212.1077 76 8 3 8814 0 18 39
D-E 0.0 -30.05 -53.5484 -83.5984 47 9 0 2608 3 9 10
E-H -13.5312 -49.1515 -121.672 -184.3547 61 11 2 5799 3 40 42
F-O 0.0 0.0 -2.2588 -2.2588 5 0 0 137 0 3 3
F-R -72.0347 -30.8511 -243.449 -346.3348 84 46 9 10120 2 14 22
G-I 0.0 2.0751 -39.4519 -37.3768 38 5 4 2317 0 5 8
G-K 0.0 0.0 -57.2378 -57.2378 28 1 4 2266 0 2 6
H-L 0.0 0.0 -9.6929 -9.6929 9 0 0 465 0 0 1
H-Q 0.0 4.6566 -26.5362 -21.8796 15 3 0 1236 0 2 9
I-J 0.0 -1.709 -26.4952 -28.2042 18 3 0 1158 0 9 15
I-N 0.0 0.0 -14.0049 -14.0049 9 0 0 488 0 0 0
J-N -35.5808 -35.5435 -238.411 -309.5353 55 19 6 9016 4 16 33
K-R -6.7199 -15.2332 -60.3077 -82.2609 30 6 1 2651 1 14 20
L-Q 0.0 0.0 -45.2353 -45.2353 22 6 4 2273 0 0 8
M-S 0.0 15.1658 -75.1511 -59.9853 45 5 3 3570 0 10 22
M-U 0.0 0.0 -3.0857 -3.0857 11 0 0 355 0 4 9
N-S 0.0 0.0 -0.1424 -0.1424 3 0 0 42 0 0 0
O-Q 0.0 -1.0993 -0.3722 -1.4715 11 0 0 118 0 7 6