3OFL
crystal structure of humanpapillomavirus18 (hpv18) capsid l1 pentamers bound to heparin oligosaccharides
Total interactions analyzed 105
Total true interactions 41
Strongest Interaction Chains M-N
Int. Res. 294
Norm. En. per Res. -3.6401
Hub Node F(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -109.3337 -18.4609 -863.034 -990.8286 292 55 16 36740 7 69 72
A-C -6.9025 0.0 -20.835 -27.7375 17 4 1 1292 0 2 1
A-D 0.0 0.0 -28.8077 -28.8077 15 0 1 1186 0 2 1
A-E -123.1718 -47.0098 -881.283 -1051.4645 291 38 16 36653 8 70 70
B-C -139.5014 -36.9466 -891.164 -1067.612 298 49 16 37147 9 71 71
B-D 0.0 0.0 -21.3291 -21.3291 15 0 1 1067 0 2 2
B-E 0.0 0.0 -25.3626 -25.3626 16 0 1 1090 0 2 1
B-H 0.0 0.0 -0.1208 -0.1208 5 0 0 37 0 0 1
B-I 0.0 11.1178 -0.532 10.5859 11 0 0 89 0 1 4
B-J -2.3758 -12.6991 -26.6136 -41.6886 29 11 0 1862 0 2 2
C-D -112.6067 -27.566 -875.888 -1016.0606 295 38 17 36614 7 70 72
C-E 0.0 0.0 -21.5023 -21.5023 16 0 1 1038 0 2 1
C-G 0.0 0.0 -3.3181 -3.3181 9 4 0 171 0 0 1
C-I 0.0 -2.219 -6.195 -8.414 10 0 0 366 0 2 0
D-E -117.3653 -44.1998 -850.136 -1011.7011 291 33 17 35541 7 71 69
F-G -146.9142 -31.1854 -887.703 -1065.8027 298 64 18 37680 8 71 75
F-H -8.3742 0.0 -28.2605 -36.6347 17 5 1 1527 0 2 1
F-I -8.1563 0.0 -26.8225 -34.9788 16 5 1 1267 0 2 1
F-J -92.9958 -39.9468 -818.071 -951.0136 287 57 16 36009 7 71 66
F-M 0.0 0.0 -0.0477 -0.0477 8 0 0 28 0 0 1
F-N 0.0 16.6229 -4.3332 12.2897 13 0 0 387 0 1 3
F-O -2.278 -11.6303 -38.9752 -52.8834 27 9 0 1994 0 2 1
G-H -136.0686 -29.2437 -861.449 -1026.7613 293 37 16 36022 7 70 70
G-I 0.0 0.0 -24.7788 -24.7788 15 2 1 1136 0 2 1
G-J 0.0 0.0 -27.6127 -27.6127 16 2 1 1231 0 2 1
G-L 0.0 0.0 -1.1325 -1.1325 11 8 0 411 0 0 1
G-M 0.0 0.0 -0.0019 -0.0019 2 0 0 1 0 0 2
G-N 0.0 -3.0674 -7.6064 -10.6738 13 1 0 451 0 2 0
H-I -120.7471 -56.9327 -844.789 -1022.4689 291 45 16 36201 10 69 70
H-J 0.0 0.0 -23.8581 -23.8581 15 2 1 1155 0 2 1
I-J -129.1432 -27.5052 -886.21 -1042.8584 293 42 16 36559 7 71 71
K-L -117.425 -27.4892 -875.294 -1020.2082 296 43 16 36771 10 71 71
K-M 0.0 0.0 -28.0167 -28.0167 16 2 1 1219 0 2 1
K-N 0.0 0.0 -31.273 -31.273 16 1 1 1239 0 2 1
K-O -116.3867 -24.7993 -866.697 -1007.883 291 35 17 35879 9 70 71
L-M -129.0617 -44.4831 -859.836 -1033.3808 292 31 16 36007 8 70 70
L-N 0.0 0.0 -22.1809 -22.1809 15 0 1 1107 0 2 1
L-O -8.2662 0.0 -30.7099 -38.9761 17 1 1 1247 0 2 2
M-N -127.8528 -46.4814 -895.861 -1070.1952 294 47 16 36935 9 70 70
M-O 0.0 0.0 -26.8744 -26.8744 16 1 1 1146 0 2 2
N-O -142.5318 -23.3436 -883.745 -1049.6204 297 41 18 36823 7 71 71