3OEH
structure of four mutant forms of yeast f1 atpase: beta-v279f
Total interactions analyzed 351
Total true interactions 59
Strongest Interaction Chains G-I
Int. Res. 93
Norm. En. per Res. -3.0819
Hub Node A(6)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B 0.0 0.0 -0.015 -0.015 2 0 0 9 0 1 0
A-C 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 1 0
A-D -111.8883 -93.8253 -543.335 -749.0486 248 28 10 23363 6 59 75
A-E -101.9791 -20.7699 -492.98 -615.7291 202 27 9 20516 5 69 67
A-G 0.0 3.0648 -81.8135 -78.7487 73 2 1 4289 0 21 11
A-I 0.0 0.0 -0.0433 -0.0433 5 0 0 19 0 1 1
B-E -60.7515 -51.257 -463.484 -575.4925 198 26 10 18840 3 43 56
B-F -99.0653 -55.3836 -578.048 -732.4968 243 34 12 23899 10 74 70
B-G 0.0 -37.0945 -24.1965 -61.291 51 5 0 2024 2 12 6
B-N -6.9583 1.4214 -23.7747 -29.3115 25 2 0 985 0 14 11
C-D -87.5352 18.1991 -502.577 -571.9132 246 18 12 21558 4 74 68
C-F -80.1649 -57.0909 -531.319 -668.5748 240 22 11 22290 6 59 76
C-G -18.8672 20.3776 -53.936 -52.4256 51 1 0 2472 1 14 13
C-I 0.0 0.0 -0.403 -0.403 9 0 0 81 0 0 1
D-F 0.0 0.0 -1.2468 -1.2468 6 0 0 181 0 0 0
D-G -27.6064 -36.1173 -90.2487 -153.9724 74 5 4 4815 3 24 18
D-I 0.0 7.1122 -0.0591 7.0531 5 0 0 14 0 1 3
E-G -10.5333 -27.0327 -76.6415 -114.2075 54 5 2 3401 1 11 3
E-K 0.0 -8.2153 -2.8019 -11.0172 17 0 0 349 0 16 19
E-N 0.0 -0.7214 -12.9104 -13.6318 42 0 0 1182 0 28 34
E-T 0.0 -4.5565 2 GLU504T, LYS40E
F-G -2.6336 -35.7808 -87.5688 -125.9832 82 5 4 4861 0 27 16
G-H -13.0362 -6.4728 -256.341 -275.85 96 12 8 10292 0 24 19
G-I -52.5542 7.9668 -242.028 -286.6154 93 17 16 10375 1 13 14
H-I 0.0 -8.6641 -92.0825 -100.7466 62 5 11 4637 3 8 6
J-K 0.0 0.0 -0.0033 -0.0033 3 0 0 6 0 0 0
J-L 0.0 0.0 -0.0008 -0.0008 2 0 0 2 0 1 0
J-M -82.9958 -85.4038 -533.146 -701.5455 242 20 11 22220 7 60 77
J-N -88.2865 -4.5732 -489.035 -581.8947 225 37 9 21517 6 72 73
J-P 0.0 -21.4346 -67.7144 -89.149 68 3 2 3807 2 23 12
K-N -74.5498 -41.0567 -436.387 -551.9936 189 32 10 18063 2 42 50
K-O -50.862 -44.7445 -583.372 -678.9785 249 33 14 24539 9 80 72
K-P -7.5999 -34.5309 -39.802 -81.9328 58 1 0 2409 2 14 11
K-X -26.6288 9.4999 10 ASN28K, ASP23K, ASP436X, ASP465X, GLU29K, GLU464X, LYS430X, LYS435X, LYS442X, THR30K
L-M -100.131 -19.0777 -665.537 -784.7458 284 31 15 27981 6 85 79
L-O -97.3578 -102.5853 -539.435 -739.3781 240 32 12 22605 7 58 69
L-P -7.51 23.5173 -26.9414 -10.9342 45 0 0 1712 1 11 6
M-O 0.0 0.0 -13.9705 -13.9705 10 1 2 785 0 0 2
M-P 0.0 -1.268 -88.3288 -89.5968 76 1 5 4460 0 29 24
M-R 0.0 0.0 -0.0246 -0.0246 2 0 0 8 0 1 3
N-P -8.1127 -38.307 -87.6532 -134.0729 62 11 3 4311 1 17 5
O-P 0.0 -8.8568 -75.4548 -84.3116 78 0 4 4055 0 25 15
O-X -14.2055 0.7067 4 ALA177X, LYS176X, LYS40O, LYS75O
P-Q -17.1311 0.0 -164.2 -181.3311 80 4 6 6624 0 17 17
P-R -22.8222 0.0 -109.739 -132.5612 68 8 14 5496 0 5 6
Q-R 0.0 0.0 -34.9907 -34.9907 44 0 7 1940 0 4 3
S-V -76.3908 -88.0092 35 ARG173S, ARG212S, ARG274V, ARG356V, ARG364S, ARG82S, ASN35V, ASP120V, ASP172S, ASP330V, ASP352V, ASP38S, ASP81S, GLN174S, GLN217S, GLN282S, GLN379V, GLU126V, GLU240S, GLU294V, GLU357S, GLU56V, GLU86S, HIS118V, HIS328V, HIS53V, LYS152V, LYS211S, LYS354V, LYS382V, LYS85S, SER372V, THR287V, THR332V, VAL36S
S-W -77.5664 -2.6098 34 ALA51S, ARG130S, ARG141S, ARG142S, ARG166S, ARG190W, ARG192W, ARG199W, ARG375S, ARG72W, ASP196W, ASP22W, ASP299S, ASP349S, ASP65W, GLU105W, GLU193W, GLU224W, GLU267W, GLU309S, GLU52S, GLU68W, GLU69S, GLY45S, GLY69W, ILE347S, LEU46S, LEU68S, LYS134S, LYS317S, MET222W, SER305S, SER346S, VAL16W
S-Y -3.1658 12.6308 6 ARG259Y, ARG293S, ASP335S, GLU266Y, GLU294S, GLU7Y
T-W -82.4464 -44.5353 28 ALA238T, ARG173T, ARG212T, ARG274W, ARG288T, ARG82T, ASN57W, ASP330W, ASP38T, ASP81T, GLN282T, GLU126W, GLU240T, GLU294W, GLU29W, GLU56W, GLU86T, GLY273W, HIS118W, HIS328W, HIS53W, LEU30W, LYS152W, LYS211T, LYS85T, PHE326W, THR287W, VAL36T
T-X -86.0289 -0.2446 40 ALA51T, ARG130T, ARG141T, ARG142T, ARG166T, ARG190X, ARG192X, ARG199X, ARG293T, ARG375T, ARG72X, ASN195X, ASN47T, ASP196X, ASP22X, ASP299T, ASP315X, ASP316X, ASP319X, ASP335T, ASP349T, ASP65X, GLU193X, GLU224X, GLU267X, GLU309T, GLU52T, GLU68X, GLU69T, GLY69X, ILE138T, ILE345T, ILE347T, LEU68T, LEU70X, LYS134T, SER337T, THR191X, THR348T, VAL16X
T-Y -7.6052 -27.5047 4 ARG257Y, ASP335T, GLN332T, GLU294T
U-V -24.0525 -4.2471 31 ARG130U, ARG141U, ARG142U, ARG166U, ARG190V, ARG192V, ARG199V, ARG375U, ARG400U, ARG72V, ASP196V, ASP299U, ASP349U, ASP394V, ASP411U, ASP65V, GLU193V, GLU224V, GLU267V, GLU309U, GLU341V, GLU52U, GLU68V, GLU69U, GLY45U, ILE347U, LYS134U, LYS393U, MET222V, SER305U, THR191V
U-X -78.0567 -98.7614 39 ARG173U, ARG212U, ARG274X, ARG288U, ARG364U, ARG82U, ASP120X, ASP288X, ASP330X, ASP352X, ASP38U, ASP81U, GLN174U, GLN220U, GLN282U, GLU126X, GLU240U, GLU294X, GLU29X, GLU376X, GLU56X, GLU86U, GLU88U, GLY273X, HIS118X, HIS328X, HIS53X, LEU351X, LYS152X, LYS211U, LYS354X, LYS361U, LYS85U, SER372X, THR129X, THR287X, TYR360U, TYR368X, VAL36U
U-Y 0.0 14.3225 12 ARG293U, ASP112Y, ASP269Y, ASP335U, ASP411U, ASP80Y, GLU266Y, GLU294U, GLU5Y, LYS113Y, LYS4Y, LYS81Y
V-Y -20.4415 -49.8115 12 ASP315V, ASP316V, ASP386V, ASP394V, GLU266Y, GLU395V, LYS11Y, LYS135Y, LYS18Y, LYS4Y, LYS81Y, PHE279V
W-Y -9.1467 -0.4998 8 ARG257Y, ARG259Y, ASP238Y, ASP316W, ASP319W, ASP386W, PHE279W, THR264Y
X-Y -17.4367 -48.7936 10 ALA389X, ARG120Y, ARG9Y, ASN243Y, ASP386X, ASP394X, GLU395X, GLU398X, HIS88Y, LEU83Y
Y-1 -26.8233 0.0 4 ASN131Y, ASP148Y, PHE431, SER91