3O58

yeast 80s ribosome. this entry consists of the 60s subunit of the first 80s in the asymmetric unit.

• Total interactions analyzed: 990
• Total true interactions: 31
• Strongest Interaction:
  • Chains: C-P
  • Int. Res.: 25
  • Norm. En. per Res.: -1.4086
• Hub Node: D(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-f	0.0	0.0	-8.5835	-8.5835	19	1	0	412	0	7	24
B-g	-7.6827	0.0	-73.0888	-80.7715	100	16	18	4882	0	8	18
C-P	-12.2594	0.0	-22.9555	-35.2149	25	1	0	1002	0	5	12
C-U	0.0	0.0	-13.6856	-13.6856	28	1	1	883	0	25	30
C-V	0.0	0.0	-5.3826	-5.3826	24	0	0	593	0	11	9
D-R	0.0	0.0	-20.0955	-20.0955	38	0	1	1520	0	9	12
D-X	0.0	0.0	-0.4428	-0.4428	6	0	0	82	0	0	7
D-d	0.0	0.0	-0.0004	-0.0004	2	0	0	1	0	0	1
E-K	0.0	0.0	-5.4353	-5.4353	16	1	0	377	0	5	19
E-T	0.0	0.0	-14.1461	-14.1461	48	20	3	1865	0	10	26
F-G	0.0	0.0	-126.301	-126.301	128	34	12	6587	0	55	70
F-N	0.0	0.0	-2.0581	-2.0581	18	0	0	352	0	1	2
H-O	0.0	0.0	-35.9304	-35.9304	78	1	13	2832	0	52	45
H-n	0.0	0.0	-0.0009	-0.0009	2	0	0	2	0	0	0
I-N	0.0	0.0	-1.9883	-1.9883	10	0	0	268	0	1	3
I-P	0.0	0.0	-1.1958	-1.1958	7	0	0	121	0	5	18
N-P	0.0	0.0	-18.9523	-18.9523	52	0	1	1756	0	9	22
N-h	0.0	0.0	-0.4684	-0.4684	7	0	0	142	0	0	0
O-f	0.0	0.0	-15.4751	-15.4751	17	1	0	797	0	1	3
O-n	0.0	0.0	-0.6479	-0.6479	7	0	0	116	0	0	0
R-Y	0.0	0.0	-6.6505	-6.6505	27	0	0	652	0	16	17
T-p	0.0	0.0	-0.1172	-0.1172	4	0	0	15	0	0	0
U-V	-4.3271	0.0	-44.2538	-48.5809	42	5	7	2018	0	12	11
W-c	0.0	0.0	-5.377	-5.377	32	0	2	657	0	19	17
W-e	0.0	0.0	-7.3914	-7.3914	15	0	0	406	0	0	10
X-e	0.0	0.0	-0.5155	-0.5155	5	0	0	68	0	0	1
Y-b	0.0	0.0	-1.772	-1.772	10	0	0	172	0	3	24
Y-r	0.0	0.0	-24.9865	-24.9865	41	1	0	1850	0	0	0
Z-g	0.0	0.0	-5.3822	-5.3822	16	0	0	456	0	3	6
Z-j	0.0	0.0	-1.8798	-1.8798	13	0	0	317	0	0	0
d-e	0.0	0.0	-0.4496	-0.4496	8	0	0	99	0	0	15

Interface residues

• A-f: ALA81f, ARG71f, ASP46A, CYS74f, GLU73f, HIS23f, LEU193A, LEU194A, LEU72f, LEU93f, LYS195A, LYS196A, LYS24f, LYS6f, PHE49A, THR26f, THR7f, VAL25f, VAL75f
• B-g: ALA129B, ALA170B, ALA51g, ALA52g, ALA56B, ALA65g, ALA68g, ALA74g, ALA75g, ALA76g, ALA78B, ALA94B, ARG174B, ARG17g, ARG23g, ARG54B, ARG80g, ARG84g, ARG87g, ASN132B, ASN79B, ASN97B, ASP176B, CYS57g, CYS60g, GLN25g, GLN47B, GLU109B, GLU80B, GLY110B, GLY167B, GLY171B, GLY172B, GLY173B, GLY50g, GLY53B, GLY53g, GLY55B, GLY66g, GLY67g, GLY81B, GLY85B, HIS50B, HIS83B, ILE166B, ILE169B, ILE44B, ILE48B, ILE54g, ILE77B, ILE83g, LEU179B, LEU180B, LEU22g, LEU29g, LEU58B, LEU86g, LEU96B, LYS177B, LYS181B, LYS27g, LYS28g, LYS46B, LYS61g, LYS62g, MET89g, PHE41g, PRO108B, PRO178B, PRO57B, SER106B, SER130B, SER21g, SER40g, SER72g, SER95B, THR111B, THR56g, THR63g, THR70g, THR73g, THR82g, THR84B, TRP55g, TYR14g, TYR18g, TYR69g, VAL107B, VAL165B, VAL168B, VAL175B, VAL26g, VAL45B, VAL49B, VAL64g, VAL71g, VAL79g, VAL82B, VAL90g, VAL98B
• C-P: ALA258C, ALA63P, ARG68P, ARG97C, ASN65P, ASP151P, GLU106P, HIS256C, HIS259C, LYS148P, LYS155P, LYS66P, MET261C, PHE64P, PRO257C, PRO96C, SER263C, THR62P, THR67P, THR95C, TRP262C, TYR149P, VAL152P, VAL260C, VAL264C
• C-U: ALA8C, ARG45U, ARG58C, ARG70C, ARG87U, ARG88U, ASN47U, ASP89U, GLU71C, GLU74C, GLU7C, GLY90U, HIS3C, LEU46U, LEU60C, LYS10U, LYS236C, LYS66C, PHE11U, PHE67C, PRO9C, SER44U, SER65C, THR9U, VAL57C, VAL72C, VAL73C, VAL91U
• C-V: ALA362C, ARG17V, ARG300C, ARG58C, ASN33V, ASP360C, ASP59C, GLU71C, GLY16V, GLY366C, ILE359C, ILE56C, LYS2V, LYS357C, MET1V, PRO15V, THR301C, THR55C, TRP358C, TYR14V, VAL354C, VAL57C, VAL72C, VAL73C
• D-R: ALA102R, ALA103R, ALA268D, ARG105R, ARG31D, ASN23R, ASP125R, ASP22R, ASP33D, GLN126R, GLY273D, ILE122R, ILE30D, ILE34D, LEU104R, LEU124R, LEU127R, LEU26R, LEU28R, LEU29R, LEU32R, LYS271D, LYS27R, LYS31R, PHE106R, PRO29D, PRO32D, SER21R, SER269D, SER270D, THR123R, THR275D, TYR25R, TYR274D, VAL129R, VAL24R, VAL272D, VAL35D
• D-X: ALA15X, ARG195D, ASN196D, LYS14X, LYS193D, TYR194D
• D-d: SER61D, TRP49d
• E-K: ARG143K, ARG152E, ARG23E, ARG24E, CYS144K, GLN151E, GLU25E, GLY146K, GLY26E, LEU150E, LYS142K, LYS145K, LYS27E, SER9E, THR154K, THR28E
• E-T: ALA24T, ALA42E, ARG20T, ARG33E, ARG35E, ASN45E, ASP29E, GLN17E, GLN39E, GLY73T, HIS22T, HIS26T, HIS40E, ILE69E, LEU27T, LEU31T, LYS21T, LYS32T, LYS34E, LYS35T, LYS41E, LYS43E, LYS69T, PHE16E, PHE19T, PHE20E, PRO19E, PRO47E, SER28T, SER67E, SER70T, SER71T, THR18E, THR38E, THR46E, THR68E, THR68T, THR70E, TYR30E, TYR30T, TYR34T, TYR44E, VAL25T, VAL33T, VAL37E, VAL67T, VAL72T, VAL93T
• F-G: ALA132F, ALA144F, ALA161F, ALA24F, ALA25F, ALA3F, ALA42G, ALA49G, ALA50G, ALA65G, ALA69G, ALA6F, ALA71G, ALA72G, ALA79G, ARG134F, ARG151G, ARG160G, ARG22F, ARG232G, ARG26F, ARG41G, ARG47G, ARG48F, ARG60G, ARG67G, ASN127F, ASN157G, ASN167F, ASN231G, ASN48G, ASN97F, ASP142F, ASP169F, ASP182G, ASP183G, ASP68G, GLN126F, GLN138F, GLN146G, GLN157F, GLN159G, GLN225G, GLN4F, GLN52G, GLN64G, GLN80G, GLU129F, GLU133F, GLU136F, GLU233G, GLU234G, GLU46G, GLU56G, GLU59G, GLU78G, GLU94F, GLU99F, GLY226G, GLY73G, GLY95F, HIS186G, HIS81G, ILE130F, ILE146F, ILE181G, ILE185G, ILE224G, ILE43G, ILE44G, ILE63G, LEU145F, LEU159F, LEU163G, LEU165F, LEU174F, LEU179G, LEU184G, LEU45G, LYS114F, LYS121G, LYS128F, LYS131F, LYS139F, LYS150F, LYS150G, LYS156F, LYS158G, LYS166F, LYS170F, LYS175F, LYS23F, LYS5F, LYS66G, LYS70G, LYS8F, MET173F, MET1F, PHE163F, PHE176F, PHE223G, PHE235G, PRO162G, PRO7F, SER12F, SER160F, SER162F, SER164F, SER164G, SER180G, SER2F, SER74G, SER92F, THR120G, THR152F, TRP9F, TYR149G, TYR51G, TYR75G, TYR76G, VAL119G, VAL135F, VAL161G, VAL77G, VAL91F, VAL93F, VAL96F, VAL98F
• F-N: ALA81F, ARG13N, ARG82F, ASN11N, ASN61F, ASN80F, GLN62N, GLY61N, LEU14N, LEU34F, LEU60N, SER10N, THR69N, TRP12N, TYR83F, VAL35F, VAL63N, VAL64N
• H-O: ALA141H, ALA168H, ALA242H, ALA244H, ALA3O, ALA87H, ARG12O, ARG20O, ARG24O, ARG26O, ARG41O, ARG44O, ARG98H, ASN137H, ASN240H, ASN85H, ASP158H, ASP17O, ASP46O, ASP83H, GLN11O, GLN32O, GLU100H, GLU161H, GLU29O, GLU89H, GLU9O, GLY135H, GLY234H, GLY235H, GLY236H, HIS138H, ILE160H, ILE237H, LEU10O, LEU136H, LEU142H, LEU162H, LEU166H, LEU169H, LEU19O, LEU22O, LEU238H, LEU7O, LEU82H, LEU93H, LYS13O, LYS241H, LYS245H, LYS248H, LYS33O, LYS5O, LYS96H, MET246H, PHE165H, PHE21O, PHE91H, PHE94H, PRO159H, PRO42O, PRO45O, PRO99H, SER16O, THR101H, THR43O, THR86H, THR90H, TRP28O, TYR30O, TYR4O, TYR6O, TYR97H, VAL139H, VAL140H, VAL163H, VAL164H, VAL18O, VAL25O
• H-n: ASN240H, UNK13n
• I-N: ASN59I, GLN27N, GLN5I, GLN62N, GLY26N, HIS58I, ILE4I, LYS25N, SER28N, THR44I
• I-P: ARG133P, ASP42I, GLY132P, HIS40I, HIS64I, ILE41I, PRO131P
• N-P: ALA110N, ALA111N, ALA173P, ALA179P, ALA181P, ALA183P, ALA185P, ALA195P, ALA196P, ALA95N, ALA96N, ARG106N, ARG109N, ARG117N, ARG124N, ARG128N, ASN182P, ASP114N, ASP189P, CYS91N, GLN126N, GLN193P, GLU107N, GLU116N, GLU187P, GLY198P, LEU112N, LEU123N, LEU194P, LEU197P, LYS101N, LYS102N, LYS125N, LYS127N, LYS176P, LYS177P, LYS192P, MET121N, PHE115N, PHE118N, SER180P, SER97N, SER98N, THR113N, THR184P, TRP94N, TRP99N, TYR199P, VAL120N, VAL122N, VAL178P, VAL190P
• N-h: ARG108N, ARG109N, GLN105N, LEU112N, UNK1h, UNK2h, UNK3h
• O-f: ASN86O, GLN47f, GLN87O, GLU91O, GLY49f, GLY51f, GLY52f, GLY82O, GLY88O, LEU92O, LYS46f, LYS83O, PHE50f, PRO84O, SER48f, THR85O, VAL89O
• O-n: ASP17O, GLN15O, LYS13O, LYS14O, SER16O, UNK27n, UNK28n
• R-Y: ALA91R, ARG117Y, ARG151R, ARG92R, ASN44Y, ASN74Y, ASP46Y, ASP76Y, ASP88Y, GLY154R, HIS152R, HIS49Y, ILE118Y, ILE43Y, ILE93R, LEU73Y, LEU75Y, LEU81Y, LYS159R, LYS47Y, LYS77Y, MET155R, MET45Y, PHE153R, PHE94R, PRO119Y, VAL150R
• T-p: ASN66T, THR68T, UNK248p, VAL67T
• U-V: ALA37V, ALA82U, ARG17V, ARG23V, ARG30V, ARG86U, ASP25V, ASP89U, ASP97U, GLN32V, GLU96U, GLY116U, GLY16V, GLY18V, GLY24V, GLY90U, ILE13V, ILE28V, LEU20V, LEU93U, LYS27V, LYS2V, PHE21V, PHE29V, PHE31V, PHE92U, PHE95U, PRO117U, PRO15V, SER26V, SER84U, THR115U, THR19V, TRP85U, TYR14V, TYR94U, VAL118U, VAL135U, VAL136U, VAL137U, VAL22V, VAL91U
• W-c: ALA29c, ALA65c, ARG138W, ARG56W, ARG63c, ASN137W, ASN55W, ASN59c, GLN34c, GLN62c, GLN65W, GLU30c, GLU60c, GLU64W, HIS53W, ILE139W, ILE58c, ILE63W, LEU102W, LEU55c, LEU57W, LYS25c, LYS26c, LYS32c, LYS35c, LYS61W, PRO66W, THR68W, TYR54W, VAL33c, VAL51W, VAL66c
• W-e: ALA14e, ARG115W, ASN117W, GLN11e, GLY118W, LYS10e, LYS15e, LYS17e, LYS18e, MET13e, MET88W, PHE7e, PRO116W, THR119W, VAL114W
• X-e: ASN32e, LEU76X, LYS77X, THR31e, TYR74X
• Y-b: ARG12Y, ARG33b, GLY13Y, GLY37b, HIS11Y, ILE38b, LYS10Y, LYS19Y, LYS34b, LYS36b
• Y-r: ALA127Y, ALA134Y, ALA140Y, ALA141Y, ALA149Y, ALA94Y, ARG128Y, ARG139Y, GLU135Y, GLU136Y, GLU146Y, GLY142Y, GLY143Y, ILE124Y, ILE138Y, LEU133Y, LEU147Y, LYS132Y, LYS137Y, PHE129Y, SER131Y, SER93Y, SER95Y, UNK-1r, UNK0r, UNK10r, UNK11r, UNK12r, UNK14r, UNK1r, UNK2r, UNK3r, UNK4r, UNK5r, UNK6r, UNK7r, UNK8r, UNK9r, VAL130Y, VAL144Y, VAL145Y
• Z-g: ALA46Z, ARG86Z, ASN47Z, ASN74Z, ASN75Z, CYS39g, CYS42g, CYS60g, GLY43g, GLY73Z, LYS44g, LYS45g, PHE41g, PRO49Z, THR48Z, VAL50Z
• Z-j: GLU55Z, GLU57Z, LEU51Z, SER54Z, TYR58Z, TYR59Z, UNK13j, UNK14j, UNK16j, UNK17j, UNK18j, UNK20j, UNK21j
• d-e: ARG25d, ARG8e, ASN50e, CYS19d, HIS16d, ILE9e, LEU18d, THR17d