3O4L

genetic and structural basis for selection of a ubiquitous t cell receptor deployed in epstein-barr virus

• Total interactions analyzed: 10
• Total true interactions: 7
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 129
  • Norm. En. per Res.: -4.1835
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-71.9727	-87.315	-380.39	-539.6776	129	21	2	13328	2	45	42
A-C	-36.1534	0.0	-241.892	-278.0454	85	16	8	8958	0	0	0
A-D	0.0	21.1999	-115.336	-94.1362	54	5	2	4538	2	19	20
A-E	-26.459	-40.8282	-60.9568	-128.2441	60	6	0	3103	5	10	17
C-D	0.0	0.0	-37.0054	-37.0054	19	1	1	1265	0	0	0
C-E	-11.2085	0.0	-46.7634	-57.9719	20	1	0	1735	0	0	0
D-E	-88.2711	-58.4117	168.875	22.1922	204	50	16	23958	7	41	33

Interface residues

• A-B: ALA117A, ALA125A, ALA15B, ALA236A, ALA246A, ALA24A, ALA40A, ARG111A, ARG12B, ARG14A, ARG17A, ARG202A, ARG21A, ARG234A, ARG35A, ARG3B, ARG48A, ARG97A, ARG97B, ASN24B, ASP119A, ASP122A, ASP238A, ASP30A, ASP34B, ASP37A, ASP39A, ASP53B, ASP59B, ASP96B, ASP98B, CYS25B, GLN115A, GLN242A, GLN2B, GLN32A, GLN87A, GLN8B, GLN96A, GLU229A, GLU232A, GLU46A, GLU50B, GLY120A, GLY237A, GLY239A, GLY26A, GLY29B, GLY91A, HIS114A, HIS13B, HIS188A, HIS191A, HIS192A, HIS31B, HIS51B, HIS93A, ILE124A, ILE1B, ILE23A, ILE7B, LEU201A, LEU206A, LEU230A, LEU54B, LEU64B, LEU65B, LYS121A, LYS186A, LYS243A, LYS58B, LYS6B, MET0B, MET189A, MET98A, MET99B, PHE22A, PHE22B, PHE241A, PHE30B, PHE36A, PHE56B, PHE62B, PHE8A, PHE9A, PRO14B, PRO235A, PRO32B, SER11A, SER11B, SER13A, SER207A, SER28B, SER33B, SER52B, SER55B, SER57B, SER61B, SER92A, THR10A, THR190A, THR200A, THR233A, THR240A, THR94A, TRP204A, TRP244A, TRP60B, TRP95B, TYR10B, TYR113A, TYR116A, TYR118A, TYR123A, TYR26B, TYR27A, TYR63B, TYR66B, TYR67B, TYR7A, TYR85A, TYR99A, VAL12A, VAL231A, VAL25A, VAL27B, VAL34A, VAL95A, VAL9B
• A-C: ALA117A, ALA139A, ALA140A, ALA150A, ALA153A, ALA158A, ALA24A, ALA69A, ALA7C, ARG157A, ARG170A, ARG65A, ARG6A, ARG75A, ARG97A, ASP77A, CYS164A, CYS3C, GLN155A, GLN72A, GLN96A, GLU154A, GLU166A, GLU55A, GLU63A, GLY100A, GLY1C, GLY26A, GLY62A, HIS114A, HIS151A, HIS70A, HIS74A, ILE124A, ILE52A, LEU156A, LEU160A, LEU168A, LEU2C, LEU5C, LEU78A, LEU81A, LEU9C, LYS144A, LYS146A, LYS66A, LYS68A, MET45A, MET5A, MET8C, PHE22A, PHE33A, PHE36A, PHE8A, PHE9A, SER71A, THR142A, THR143A, THR163A, THR4C, THR64A, THR73A, THR80A, TRP133A, TRP147A, TRP167A, TRP51A, TYR116A, TYR118A, TYR123A, TYR159A, TYR171A, TYR59A, TYR7A, TYR84A, TYR85A, TYR99A, VAL152A, VAL25A, VAL28A, VAL34A, VAL67A, VAL6C, VAL76A, VAL95A
• A-D: ALA150A, ALA153A, ALA158A, ALA69A, ALA96D, ARG157A, ARG169A, ARG170A, ARG65A, ARG97D, ASN53D, ASN94D, ASN95D, ASP27D, ASP61A, ASP93D, CYS164A, GLN155A, GLU154A, GLU161A, GLU166A, GLU58A, GLU63A, GLY162A, GLY62A, HIS151A, HIS70A, ILE50D, LEU156A, LEU160A, LEU33D, LYS57D, LYS66A, LYS68A, LYS69D, MET54D, MET99D, PHE51D, SER28D, SER29D, SER30D, SER52D, THR163A, THR31D, THR64A, TRP167A, TRP60A, TYR159A, TYR32D, TYR34D, TYR49D, TYR59A, VAL152A, VAL67A
• A-E: ALA149A, ALA150A, ALA153A, ALA31E, ALA49E, ALA57E, ALA69A, ALA73E, ARG65A, ARG75A, ARG98E, ASN103E, ASN52E, ASP61A, ASP77A, ASP99E, GLN155A, GLN30E, GLN43A, GLN61E, GLN72A, GLU154A, GLU19A, GLU53E, GLU60E, GLY100E, GLY102E, GLY104E, GLY54E, HIS151A, HIS70A, HIS72E, LEU156A, LEU47E, LEU75E, LYS146A, LYS56E, LYS66A, LYS68A, MET34E, MET48E, PHE35E, SER51E, SER55E, SER71A, SER74E, THR101E, THR143A, THR32E, THR33E, THR50E, THR58E, THR64A, THR73A, THR80A, TRP147A, TYR105E, TYR59E, VAL152A, VAL76A
• C-D: ALA7C, ALA96D, ARG97D, ASN94D, ASN95D, ASP93D, CYS3C, GLU92D, GLY1C, LEU2C, LEU5C, PHE51D, SER29D, SER30D, THR31D, THR4C, TYR32D, TYR34D, VAL6C
• C-E: ALA31E, ALA7C, ARG98E, ASN103E, ASN52E, ASP99E, GLN30E, GLY100E, GLY102E, GLY104E, LEU5C, LEU9C, MET8C, PHE35E, THR101E, THR32E, THR33E, THR4C, TYR105E, VAL6C
• D-E: ALA118D, ALA128E, ALA135E, ALA143E, ALA149E, ALA172D, ALA174D, ALA184E, ALA191E, ALA200E, ALA239E, ALA241E, ALA42D, ALA49E, ALA91D, ALA96D, ALA97E, ARG123D, ARG163D, ARG189E, ARG195E, ARG197E, ARG244E, ARG97D, ARG98E, ASN103E, ASN114D, ASN170D, ASN94D, ASN95D, ASP102D, ASP116D, ASP124D, ASP129D, ASP137D, ASP149D, ASP151D, ASP156D, ASP161D, ASP175E, ASP195D, ASP93D, CYS133D, CYS147E, CYS158D, CYS173E, CYS23D, CYS90D, CYS95E, GLN105D, GLN121D, GLN141E, GLN146D, GLN177E, GLN182E, GLN38D, GLN39E, GLN43E, GLN45D, GLN61E, GLN7D, GLU126E, GLU131E, GLU134E, GLU136E, GLU158E, GLU181E, GLU240E, GLU39D, GLU60E, GLU92D, GLY101D, GLY103D, GLY104E, GLY108E, GLY110E, GLY151E, GLY171E, GLY41D, GLY43D, HIS139E, HIS169E, ILE137E, ILE154D, ILE87D, ILE94E, LEU106D, LEU11D, LEU122D, LEU134D, LEU145E, LEU148E, LEU160D, LEU179E, LEU192E, LEU196E, LEU44D, LEU45E, LEU46D, LEU47E, LEU98D, LEU9D, LYS126D, LYS130D, LYS142E, LYS148D, LYS157D, LYS168D, LYS180E, LYS42E, MET162D, MET165D, MET46E, MET48E, MET99D, PHE100D, PHE107E, PHE10D, PHE130E, PHE135D, PHE138D, PHE167D, PHE197D, PHE198D, PHE202E, PHE35E, PHE40E, PHE89D, PHE92E, PRO115D, PRO117D, PRO132E, PRO176E, PRO178E, PRO183E, PRO199D, PRO201D, PRO40D, PRO41E, SER109E, SER125D, SER127D, SER128D, SER131D, SER133E, SER138E, SER147D, SER150D, SER164D, SER169D, SER170E, SER171D, SER176D, SER188E, SER193E, SER194E, SER199E, SER200D, SER238E, SER44E, SER8D, SER96E, THR104D, THR106E, THR136D, THR140E, THR144E, THR150E, THR155D, THR174E, THR196D, THR201E, THR33E, THR50E, THR58E, TRP11E, TRP161E, TRP175D, TRP203E, TRP242E, TRP36E, TYR105E, TYR120D, TYR153D, TYR190E, TYR32D, TYR34D, TYR36D, TYR37E, TYR59E, TYR88D, VAL107D, VAL119D, VAL127E, VAL129E, VAL132D, VAL144D, VAL146E, VAL152D, VAL159D, VAL168E, VAL172E, VAL173D, VAL198E