3O2R

structural flexibility in region involved in dimer formation of nuclease domain of ribonuclase iii (rnc) from campylobacter jejuni

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 112
  • Norm. En. per Res.: -3.3053
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-37.9595	-6.1784	-321.08	-365.218	113	8	11	12634	2	42	61
A-D	0.0	1.6246	-10.5311	-8.9065	17	0	0	800	0	11	13
B-C	0.0	0.8638	-9.8802	-9.0164	17	0	0	692	0	11	13
B-D	-24.8617	-33.8953	-110.571	-169.328	70	3	1	5630	2	32	28
C-D	-39.4386	-13.588	-317.165	-370.1915	112	8	11	12457	2	41	61

Interface residues

• A-B: ALA117A, ALA117B, ALA121A, ALA121B, ALA126A, ALA126B, ALA131A, ALA131B, ALA45A, ALA45B, ALA60A, ALA60B, ALA63A, ALA63B, ALA72A, ALA72B, ARG38A, ARG38B, ARG71A, ARG71B, ASN35A, ASN35B, ASN36A, ASN36B, ASP113A, ASP44A, ASP44B, ASP48A, ASP48B, ASP62A, ASP62B, ASP66A, ASP66B, GLU125A, GLU125B, GLU129A, GLU129B, GLU37A, GLU37B, GLU40A, GLU40B, GLU53A, GLU53B, GLU64A, GLU64B, GLY120A, GLY120B, GLY127A, GLY127B, GLY43A, GLY43B, GLY52A, GLY52B, GLY65A, GLY65B, HIS123A, HIS123B, HIS23A, HIS23B, HIS57A, HIS57B, ILE119B, LEU124A, LEU124B, LEU20A, LEU20B, LEU39A, LEU39B, LEU42A, LEU42B, LEU47A, LEU47B, LEU49A, LEU49B, LEU55A, LEU55B, LEU67A, LEU67B, LEU70A, LEU70B, LYS132A, LYS132B, LYS28A, LYS28B, LYS58A, LYS58B, LYS61A, LYS61B, LYS69A, LYS69B, PHE128A, PHE128B, PHE130A, PHE130B, PHE41A, PHE41B, PHE56A, PHE56B, PHE59A, PHE59B, SER33A, SER33B, SER68A, SER68B, TYR54A, TYR54B, VAL46A, VAL46B, VAL50A, VAL50B, VAL51A, VAL51B, VAL75B
• A-D: ALA126A, ALA131A, ASP17D, GLN9D, GLU125A, GLU129A, GLU14D, GLU5D, GLY127A, HIS123A, LEU124A, LYS16A, LYS16D, LYS18D, PHE128A, PHE130A, PHE15D
• B-C: ALA126C, ALA131C, GLN9B, GLU125C, GLU129C, GLU14B, GLU5B, GLY127C, HIS123C, LEU124C, LYS16B, LYS16C, LYS18B, PHE128C, PHE130B, PHE130C, PHE15B
• B-D: ALA126B, ALA126D, ALA131B, ALA131D, ALA135B, ALA135D, ARG137B, ARG137D, GLN9B, GLN9D, GLU125B, GLU125D, GLU129B, GLU129D, GLU140B, GLU140D, GLU14B, GLU14D, GLU53B, GLU53D, GLU5B, GLU5D, GLU8B, GLU8D, GLY127B, GLY127D, HIS57B, HIS57D, ILE122B, ILE122D, ILE134B, ILE134D, LEU11B, LEU11D, LEU136B, LEU136D, LEU138B, LEU138D, LEU55B, LYS132B, LYS132D, LYS141B, LYS141D, LYS16B, LYS16D, LYS58B, LYS58D, LYS6B, LYS6D, PHE128B, PHE128D, PHE130B, PHE130D, PHE15B, PHE15D, PHE56B, PHE56D, PHE59B, SER10B, SER10D, THR12B, THR12D, THR133B, THR133D, TYR13B, TYR13D, TYR54B, TYR54D, VAL50B, VAL50D
• C-D: ALA117C, ALA117D, ALA121C, ALA121D, ALA126C, ALA126D, ALA131C, ALA131D, ALA45C, ALA45D, ALA60C, ALA60D, ALA63C, ALA63D, ALA72C, ALA72D, ARG38C, ARG38D, ARG71C, ARG71D, ASN35C, ASN35D, ASN36C, ASN36D, ASP113C, ASP44C, ASP44D, ASP48C, ASP48D, ASP62C, ASP62D, ASP66C, ASP66D, GLU125D, GLU129C, GLU129D, GLU37C, GLU37D, GLU40C, GLU40D, GLU53C, GLU53D, GLU64C, GLU64D, GLY120C, GLY120D, GLY127C, GLY127D, GLY43C, GLY43D, GLY52C, GLY52D, GLY65C, GLY65D, HIS123C, HIS123D, HIS23C, HIS23D, HIS57C, HIS57D, ILE119D, LEU124C, LEU124D, LEU20C, LEU20D, LEU39C, LEU39D, LEU42C, LEU42D, LEU47C, LEU47D, LEU49C, LEU49D, LEU55C, LEU55D, LEU67C, LEU67D, LEU70C, LEU70D, LYS132C, LYS132D, LYS28C, LYS28D, LYS58C, LYS58D, LYS61C, LYS61D, LYS69C, LYS69D, PHE128C, PHE128D, PHE130C, PHE130D, PHE41C, PHE41D, PHE56C, PHE56D, PHE59C, PHE59D, SER33C, SER33D, SER68C, SER68D, TYR54C, TYR54D, VAL46C, VAL46D, VAL50C, VAL50D, VAL51C, VAL51D, VAL75D