3NZ8

crystal structure of the hiv-2 neutralizing fab fragment 7c8

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: H-L
  • Int. Res.: 200
  • Norm. En. per Res.: -2.9186
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-36.1701	-21.9694	-510.348	-568.4875	197	15	10	19584	2	17	14
A-H	-32.862	0.0	-33.3437	-66.2057	23	2	1	1290	0	1	1
A-L	-10.5744	0.0	-3.4828	-14.0573	18	1	0	466	0	0	1
B-H	0.0	0.0	-8.5348	-8.5348	15	0	0	438	0	0	0
B-L	0.0	0.0	-0.1254	-0.1254	5	0	0	32	0	2	1
H-L	-48.951	-10.9625	-523.808	-583.7215	200	10	12	19699	1	19	18

Interface residues

• A-B: ALA100A, ALA125A, ALA130B, ALA168A, ALA93A, ARG213A, ARG94A, ASN133A, ASN137B, ASN138B, ASN161B, ASN210B, ASN30B, ASN35A, ASN53B, ASN57A, ASN60A, ASN99A, ASP101A, ASP165B, ASP167B, ASP170B, ASP1B, ASP214A, ASP33A, ASP34B, CYS134B, CYS140A, CYS88B, CYS92A, GLN105A, GLN124B, GLN166B, GLN171A, GLN38B, GLN39A, GLN42B, GLN43A, GLN6B, GLN90B, GLU123B, GLU46A, GLU61A, GLU6A, GLY101B, GLY104A, GLY106A, GLY127A, GLY128B, GLY129B, GLY139A, GLY158B, GLY162A, GLY41B, GLY42A, GLY44A, GLY49A, GLY91B, GLY95A, GLY97A, GLY99B, HIS164A, HIS30B, HIS93B, ILE117B, ILE210A, ILE29B, ILE48A, ILE48B, LEU124A, LEU125B, LEU136B, LEU138A, LEU141A, LEU159A, LEU160B, LEU170A, LEU174A, LEU177A, LEU179B, LEU181B, LEU33B, LEU37B, LEU45A, LEU46B, LEU47B, LEU9B, LYS103B, LYS143A, LYS169B, LYS207B, LYS208A, LYS209A, LYS38A, LYS45B, LYS50B, LYS58A, LYS62A, LYS64A, MET100A, MET135A, MET175B, PHE118B, PHE135B, PHE139B, PHE166A, PHE209B, PHE55B, PHE63A, PHE89B, PHE91A, PHE96B, PHE98B, PRO119B, PRO120B, PRO123A, PRO126A, PRO167A, PRO44B, PRO95B, SER100B, SER116B, SER120A, SER121B, SER122B, SER127B, SER131B, SER160A, SER161A, SER162B, SER168B, SER171B, SER172A, SER174B, SER176B, SER177B, SER178A, SER179A, SER180A, SER208B, SER43B, SER56B, SER92B, THR102B, THR107A, THR114B, THR126B, THR137A, THR164B, THR165A, THR172B, THR176A, THR178B, THR180B, THR182A, THR31B, THR97B, TRP103A, TRP154A, TRP163B, TRP188A, TRP35B, TRP36A, TRP47A, TRP50A, TYR100A, TYR102A, TYR122A, TYR173B, TYR175A, TYR186B, TYR30B, TYR32B, TYR36B, TYR49B, TYR59A, TYR86B, TYR87B, TYR96A, VAL100A, VAL115B, VAL121A, VAL132B, VAL133B, VAL136A, VAL142A, VAL159B, VAL163A, VAL169A, VAL181A, VAL211A, VAL2A, VAL37A, VAL51B, VAL85B, VAL89A, VAL94B
• A-H: ALA1H, ALA24H, ARG94A, ASN99A, GLN3H, GLU5H, GLY26A, GLY26H, GLY97A, LEU4H, LYS23H, LYS98A, SER25H, THR28A, THR30A, THR31A, TYR100A, TYR102H, TYR27A, TYR27H, TYR32A, VAL100A, VAL2H
• A-L: ALA1A, ARG61L, ASP60L, GLN3A, GLU81L, GLY26A, GLY57L, LYS39L, LYS45L, PHE62L, PRO59L, SER25A, SER56L, THR28A, TYR102A, TYR27A, VAL2A, VAL58L
• B-H: ARG61B, ARG77B, ASN155H, ASP60B, GLU79B, GLY157H, GLY16B, LEU159H, SER156H, SER158H, SER160H, SER76B, THR151H, THR153H, TRP154H
• B-L: GLN42L, GLU79B, GLY57B, LYS169L, SER56B
• H-L: ALA100H, ALA125H, ALA130L, ALA168H, ALA93H, ARG211L, ARG213H, ARG94H, ASN137L, ASN138L, ASN157L, ASN161L, ASN190L, ASN210L, ASN212L, ASN30L, ASN35H, ASN53L, ASN57H, ASN60H, ASN99H, ASP101H, ASP165L, ASP167L, ASP170L, ASP1L, ASP214H, ASP33H, ASP34L, CYS134L, CYS140H, CYS88L, CYS92H, GLN105H, GLN124L, GLN171H, GLN38L, GLN39H, GLN42L, GLN43H, GLN90L, GLU123L, GLU213L, GLU46H, GLU61H, GLU6H, GLY101L, GLY104H, GLY106H, GLY127H, GLY128L, GLY129L, GLY139H, GLY158L, GLY162H, GLY41L, GLY42H, GLY44H, GLY49H, GLY91L, GLY95H, GLY97H, GLY99L, HIS164H, HIS30L, HIS93L, ILE117L, ILE210H, ILE48H, ILE48L, LEU124H, LEU125L, LEU136L, LEU138H, LEU141H, LEU160L, LEU170H, LEU174H, LEU177H, LEU179L, LEU181L, LEU33L, LEU37L, LEU45H, LEU46L, LEU47L, LYS103L, LYS143H, LYS169L, LYS207L, LYS208H, LYS209H, LYS38H, LYS39L, LYS45L, LYS50L, LYS58H, LYS62H, LYS64H, MET100H, MET135H, MET175L, PHE118L, PHE135L, PHE139L, PHE166H, PHE209L, PHE55L, PHE63H, PHE89L, PHE91H, PHE96L, PHE98L, PRO119L, PRO120L, PRO123H, PRO126H, PRO167H, PRO212H, PRO40L, PRO44L, PRO95L, SER100L, SER116L, SER120H, SER121L, SER122L, SER127L, SER131L, SER160H, SER161H, SER162L, SER168L, SER172H, SER174L, SER176L, SER177L, SER178H, SER179H, SER180H, SER208L, SER43L, SER56L, SER92L, THR107H, THR114L, THR126L, THR132H, THR137H, THR164L, THR165H, THR172L, THR176H, THR178L, THR180L, THR182H, THR31L, THR97L, TRP103H, TRP154H, TRP163L, TRP188H, TRP35L, TRP36H, TRP47H, TRP50H, TYR100H, TYR102H, TYR122H, TYR173L, TYR175H, TYR186L, TYR192L, TYR30L, TYR32L, TYR36L, TYR49L, TYR59H, TYR86L, TYR87L, TYR90H, TYR96H, VAL100H, VAL115L, VAL121H, VAL132L, VAL133L, VAL136H, VAL142H, VAL159L, VAL163H, VAL169H, VAL181H, VAL211H, VAL2H, VAL37H, VAL51L, VAL85L, VAL89H, VAL94L