3NVI

structure of n-terminal truncated nop56/58 bound with l7ae and box c/d rna

• Total interactions analyzed: 15
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 143
  • Norm. En. per Res.: -4.3505
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-7.0621	57.4308	-144.5	-94.1313	62	4	2	6009	1	13	15
A-C	-70.3405	-126.8946	-424.882	-622.117	143	15	17	18003	9	64	80
C-D	-11.7894	53.9913	-134.084	-91.8821	64	2	2	5802	0	13	14

Interface residues

• A-B: ALA283A, ALA337A, ALA341A, ALA343A, ALA344A, ALA43B, ALA65B, ALA98B, ARG280A, ARG334A, ARG345A, ARG46B, ASN259A, ASN38B, ASP347A, ASP59B, CYS71B, GLU281A, GLU352A, GLU357A, GLU361A, GLU39B, GLU45B, GLU61B, GLU62B, GLU72B, GLU73B, GLY338A, GLY351A, HIS66B, ILE290A, ILE342A, ILE354A, ILE63B, LEU303A, LEU358A, LEU67B, LEU70B, LYS339A, LYS42B, LYS74B, MET284A, MET285A, PHE349A, PRO286A, PRO60B, PRO68B, PRO69B, SER287A, SER288A, SER350A, SER6B, THR289A, THR37B, THR40B, THR41B, TYR348A, TYR7B, VAL346A, VAL44B, VAL58B, VAL64B
• A-C: ALA130A, ALA130C, ALA138A, ALA138C, ALA141A, ALA141C, ALA154A, ALA154C, ALA218A, ALA218C, ALA232A, ALA232C, ALA252A, ALA252C, ARG131A, ARG131C, ARG155A, ARG155C, ARG157A, ARG157C, ARG187A, ARG229A, ARG229C, ARG237A, ARG237C, ARG242A, ARG242C, ARG251A, ARG251C, ASP132A, ASP132C, ASP143A, ASP143C, ASP144A, ASP144C, ASP146A, ASP146C, ASP221A, ASP221C, ASP224A, ASP224C, ASP236A, ASP236C, ASP247A, ASP247C, ASP255A, ASP255C, GLN137A, GLN137C, GLN222A, GLN222C, GLN230A, GLN230C, GLN240A, GLN240C, GLU140A, GLU140C, GLU158A, GLU158C, GLU226A, GLU226C, GLU233A, GLU233C, GLU234A, GLU234C, GLU246A, GLU246C, GLY129A, GLY129C, GLY217A, GLY217C, HIS163A, HIS163C, HIS186A, ILE136A, ILE136C, ILE139A, ILE139C, ILE149A, ILE149C, ILE225A, ILE225C, ILE235A, ILE235C, ILE249A, ILE249C, LEU142A, LEU142C, LEU151A, LEU151C, LEU152A, LEU152C, LEU156A, LEU156C, LEU162A, LEU162C, LEU231A, LEU231C, LEU238A, LEU238C, LEU241A, LEU241C, LEU245A, LEU245C, LYS133A, LYS133C, LYS147A, LYS147C, LYS243A, LYS243C, LYS244A, LYS244C, MET134A, MET134C, MET220A, MET220C, SER128A, SER128C, SER161A, SER161C, SER274C, THR223A, THR223C, TRP159A, TRP159C, TRP219A, TRP219C, TYR160A, TYR160C, TYR239A, TYR239C, TYR248A, TYR248C, VAL135A, VAL135C, VAL145A, VAL145C, VAL148A, VAL148C, VAL227A, VAL227C, VAL228A, VAL228C
• C-D: ALA283C, ALA337C, ALA341C, ALA343C, ALA344C, ALA43D, ALA65D, ALA98D, ARG280C, ARG334C, ARG345C, ARG46D, ASN259C, ASN38D, ASP347C, ASP59D, CYS71D, GLU281C, GLU352C, GLU357C, GLU361C, GLU39D, GLU45D, GLU61D, GLU62D, GLU72D, GLU73D, GLY338C, GLY351C, HIS302C, HIS66D, ILE290C, ILE342C, ILE354C, ILE63D, LEU282C, LEU299C, LEU303C, LEU358C, LEU67D, LEU70D, LYS339C, LYS42D, MET284C, MET285C, PHE349C, PRO286C, PRO60D, PRO68D, PRO69D, SER287C, SER288C, SER350C, SER6D, SER99D, THR289C, THR37D, THR40D, THR41D, TYR348C, TYR7D, VAL346C, VAL58D, VAL64D