3NPG

crystal structure of a protein with unknown function from duf364 family (ph1506) from pyrococcus horikoshii at 2.70 a resolution

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 107
  • Norm. En. per Res.: -4.9412
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-84.8477	-41.0422	-340.801	-466.6909	109	16	13	13691	6	35	24
A-C	-53.2255	-79.2095	-245.964	-378.399	107	12	3	9384	7	40	46
A-D	0.0	0.0	-13.8683	-13.8683	15	0	0	704	0	15	15
B-C	0.0	0.0	-22.5422	-22.5422	14	1	0	941	0	12	11
B-D	-40.7404	-87.4185	-234.429	-362.588	101	18	3	8902	7	40	44
C-D	-129.9141	-58.2347	-340.563	-528.7119	107	18	12	13793	8	35	22

Interface residues

• A-B: ARG56A, ARG56B, ASN143A, ASN143B, ASN59A, ASN59B, ASN77A, ASN77B, ASP24A, ASP24B, GLN55A, GLN55B, GLU52A, GLU52B, GLU53A, GLU53B, GLU62A, GLU62B, GLU63A, GLU63B, GLU68A, GLU68B, GLU80A, GLU80B, GLY232A, GLY232B, GLY236A, GLY236B, GLY28A, GLY28B, ILE61A, ILE61B, ILE78A, ILE79A, ILE79B, LEU146A, LEU146B, LEU226A, LEU226B, LEU229A, LEU229B, LEU22A, LEU22B, LEU231A, LEU231B, LEU29A, LEU29B, LEU50A, LEU50B, LEU83A, LEU83B, LYS145A, LYS145B, LYS224A, LYS224B, LYS228A, LYS228B, LYS230A, LYS230B, LYS235A, LYS235B, LYS72A, LYS72B, PHE234A, PHE234B, PHE237A, PHE237B, PHE25A, PHE25B, PHE27A, PHE27B, PHE69A, PHE69B, PRO125A, PRO30A, PRO30B, PRO51A, PRO51B, PRO64A, PRO64B, SER233A, SER233B, SER239B, SER26A, SER26B, SER60A, SER60B, SER65A, SER65B, THR32A, THR32B, THR49A, THR49B, THR58A, THR58B, THR82A, THR82B, TRP33A, TRP33B, TYR31A, TYR31B, TYR57A, TYR57B, VAL227A, VAL227B, VAL23A, VAL23B, VAL54A, VAL54B
• A-C: ARG142A, ARG142C, ARG149A, ARG149C, ARG185A, ARG185C, ARG56A, ARG56C, ARG81A, ARG81C, ARG8A, ASN123C, ASN143A, ASN143C, ASN176A, ASN176C, ASN2A, ASN77A, ASN77C, ASP148A, ASP148C, ASP150A, ASP150C, ASP154A, ASP154C, ASP180A, ASP180C, ASP184A, ASP184C, ASP74A, ASP74C, CYS173A, CYS173C, GLN55A, GLN55C, GLU141A, GLU141C, GLU157A, GLU157C, GLU163A, GLU163C, GLU52A, GLU52C, GLU53A, GLU53C, GLY0A, GLY177A, GLY177C, GLY3A, GLY3C, HIS159A, HIS159C, ILE160A, ILE160C, ILE182A, ILE182C, ILE78A, ILE78C, LEU146C, LEU156A, LEU156C, LEU179A, LEU179C, LEU183A, LEU183C, LEU50A, LEU50C, LEU5A, LEU5C, LEU6A, LEU6C, LEU76A, LEU76C, LYS187A, LYS187C, PHE140A, PHE140C, PRO162A, PRO162C, PRO51A, PRO51C, SER153A, SER153C, SER75A, SER75C, SER7A, THR151A, THR151C, THR155A, THR155C, THR178A, THR178C, TRP147A, TRP147C, TYR138A, TYR138C, TYR152A, TYR152C, TYR158A, TYR158C, TYR57C, VAL139A, VAL139C, VAL175A, VAL175C, VAL54A, VAL54C
• A-D: ARG149A, ARG149D, ASN143A, ASN143D, ASP148A, ASP148D, LEU146A, LEU146D, LYS145A, LYS145D, PRO125A, PRO125D, THR151D, TRP147A, TRP147D
• B-C: ARG149C, ASN123B, ASN143B, ASN143C, ASP148B, ASP148C, LEU146B, LEU146C, LYS145B, LYS145C, PRO125B, PRO126B, TRP147B, TRP147C
• B-D: ALA186D, ARG142B, ARG142D, ARG149B, ARG149D, ARG185B, ARG185D, ARG56B, ARG56D, ARG81B, ARG81D, ARG8D, ASN123B, ASN143B, ASN143D, ASN176B, ASN176D, ASN77B, ASN77D, ASP148B, ASP148D, ASP150B, ASP150D, ASP154B, ASP154D, ASP180B, ASP180D, ASP184B, ASP184D, ASP74B, ASP74D, CYS173B, CYS173D, GLN55B, GLN55D, GLU141B, GLU141D, GLU157B, GLU157D, GLU52B, GLU52D, GLU53B, GLU53D, GLY177B, GLY177D, HIS159B, HIS159D, ILE160B, ILE160D, ILE182B, ILE182D, ILE78B, ILE78D, LEU146B, LEU156B, LEU156D, LEU179B, LEU179D, LEU183B, LEU183D, LEU50B, LEU50D, LEU5B, LEU5D, LEU6B, LEU6D, LEU76B, LEU76D, LYS187B, LYS187D, PHE140B, PHE140D, PRO51B, PRO51D, SER153B, SER153D, SER75B, SER75D, SER7D, THR151B, THR151D, THR155B, THR155D, THR178B, THR178D, THR58B, THR58D, TRP147B, TRP147D, TYR138B, TYR138D, TYR152B, TYR152D, TYR158B, TYR158D, TYR57B, VAL139B, VAL175B, VAL175D, VAL54B, VAL54D
• C-D: ARG56C, ARG56D, ASN143C, ASN143D, ASN59C, ASN59D, ASN77C, ASN77D, ASP24C, ASP24D, GLN55C, GLN55D, GLU52C, GLU52D, GLU53D, GLU62C, GLU62D, GLU63C, GLU63D, GLU68C, GLU68D, GLU80C, GLU80D, GLY232C, GLY232D, GLY236C, GLY236D, GLY28C, GLY28D, ILE61C, ILE61D, ILE78D, ILE79C, ILE79D, LEU146C, LEU146D, LEU226C, LEU226D, LEU229C, LEU229D, LEU22C, LEU22D, LEU231C, LEU231D, LEU29C, LEU29D, LEU35D, LEU50C, LEU50D, LEU83C, LEU83D, LYS145C, LYS145D, LYS224C, LYS224D, LYS228C, LYS228D, LYS230C, LYS230D, LYS235C, LYS235D, LYS72C, LYS72D, PHE234C, PHE234D, PHE237C, PHE237D, PHE25C, PHE25D, PHE27C, PHE27D, PHE69C, PHE69D, PRO30C, PRO30D, PRO51C, PRO51D, PRO64C, PRO64D, SER233C, SER233D, SER26C, SER26D, SER60C, SER60D, SER65C, SER65D, THR32C, THR32D, THR49C, THR49D, THR58C, THR58D, THR82C, THR82D, TRP33C, TRP33D, TYR31C, TYR31D, TYR57C, TYR57D, VAL227C, VAL227D, VAL23C, VAL23D, VAL54C, VAL54D