3NBT

crystal structure of trimeric cytochrome c from horse heart

• Total interactions analyzed: 15
• Total true interactions: 12
• Strongest Interaction:
  • Chains: A-F
  • Int. Res.: 90
  • Norm. En. per Res.: -5.482
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	1.0501	-0.4292	0.6209	5	0	0	130	0	2	4
A-C	0.0	-10.5774	-17.8891	-28.4665	33	0	0	1002	0	6	16
A-E	-43.3572	-47.3442	-370.922	-461.6234	92	11	13	14600	3	46	57
A-F	-70.162	-47.5912	-375.624	-493.3772	90	8	12	14896	5	45	57
B-C	-62.8983	-51.1917	-358.858	-472.948	90	18	13	14461	5	46	57
B-D	-39.0663	-42.1607	-359.671	-440.8981	89	16	13	14517	3	42	59
B-E	0.0	-5.4845	-19.1759	-24.6605	32	0	0	991	0	6	16
C-D	-65.9455	-48.0475	-357.59	-471.583	88	17	12	14214	4	43	57
C-F	0.0	1.1571	-0.4265	0.7307	5	0	0	131	0	2	4
D-E	0.0	2.0425	-0.6498	1.3927	6	0	0	183	0	2	4
D-F	0.0	-5.6733	-18.535	-24.2083	31	0	0	863	0	6	16
E-F	-41.1658	-42.6158	-357.948	-441.7296	88	9	13	14178	2	43	57

Interface residues

• A-B: ASN70A, ASN70B, GLU69A, LYS73A, LYS73B
• A-C: ALA51A, ALA51C, ASN52A, ASN52C, ASN54A, ASN54C, ASP50A, ASP50C, GLU66A, GLU66C, GLY77A, GLY77C, ILE57C, ILE75A, ILE75C, LYS55A, LYS55C, LYS72A, LYS72C, LYS73A, LYS73C, LYS79A, LYS79C, LYS86A, LYS86C, PRO76A, PRO76C, THR49A, THR49C, THR78A, THR78C, TYR74A, TYR74C
• A-E: ALA101E, ALA15A, ALA83E, ALA96E, ARG38A, ARG91E, ASN103E, ASN31A, ASN31E, ASN70A, ASP2A, ASP2A9, ASP93E, CB4.4075355.44510, CYS14A, CYS17A, CYS17E, GLN12A, GLN16A, GLN16E, GLU104E, GLU21A, GLU4A, GLU61A, GLU62A, GLU66A, GLU69A, GLU90E, GLU92E, GLY1A, GLY23A, GLY29E, GLY34A, GLY37A, GLY45E, GLY6A, GLY84E, HIS18A, HIS26E, HIS33A, ILE81A, ILE81E, ILE85E, ILE95E, ILE9A, LEU32A, LEU35A, LEU64A, LEU68A, LEU94E, LEU98E, LYS100E, LYS13A, LYS22A, LYS25E, LYS27E, LYS5A, LYS60A, LYS72A, LYS72E, LYS73A, LYS79A, LYS79E, LYS7A, LYS86E, LYS87E, LYS88E, LYS8A, LYS99E, MET65A, MET80A, MET80E, PHE10A, PHE36A, PHE46E, PHE82E, PRO30E, PRO71A, THR102E, THR19A, THR28A, THR28E, THR47E, THR63A, THR78A, THR89E, TRP59A, TYR67A, TYR97E, VAL11A, VAL20A, VAL3A
• A-F: ALA101A, ALA15F, ALA83A, ALA96A, ARG38F, ARG91A, ASN103A, ASN31A, ASN31F, ASN70F, ASP2F, ASP93A, CYS14F, CYS17A, CYS17F, GLN12F, GLN16A, GLN16F, GLU104A, GLU21F, GLU4F, GLU61F, GLU62F, GLU66F, GLU69F, GLU90A, GLU92A, GLY1F, GLY23F, GLY24F, GLY29A, GLY34F, GLY45A, GLY6F, GLY84A, HIS18F, HIS26A, HIS33F, ILE81A, ILE81F, ILE85A, ILE95A, ILE9F, LEU32F, LEU35F, LEU64F, LEU68F, LEU94A, LEU98A, LYS100A, LYS13F, LYS22F, LYS25A, LYS27A, LYS5F, LYS60F, LYS72A, LYS72F, LYS73F, LYS79A, LYS79F, LYS7F, LYS86A, LYS87A, LYS88A, LYS8F, LYS99A, MET65F, MET80A, MET80F, PHE10F, PHE36F, PHE46A, PHE82A, PHE82F, PRO30A, PRO71F, THR102A, THR19F, THR28A, THR28F, THR47A, THR63F, THR89A, TRP59F, TYR67F, TYR97A, VAL11F, VAL20F, VAL3F
• B-C: ALA101C, ALA15B, ALA83C, ALA96C, ARG38B, ARG91C, ASN103C, ASN31B, ASN31C, ASN70B, ASP2B, ASP93C, CYS14B, CYS17B, CYS17C, GLN12B, GLN16B, GLN16C, GLU104C, GLU21B, GLU4B, GLU61B, GLU62B, GLU66B, GLU69B, GLU90C, GLU92C, GLY1B, GLY23B, GLY24B, GLY29C, GLY34B, GLY45C, GLY6B, GLY84C, HIS18B, HIS26C, HIS33B, ILE81B, ILE81C, ILE85C, ILE95C, ILE9B, LEU32B, LEU35B, LEU64B, LEU68B, LEU94C, LEU98C, LYS100C, LYS13B, LYS22B, LYS25C, LYS27C, LYS5B, LYS60B, LYS72B, LYS73B, LYS79B, LYS79C, LYS7B, LYS86C, LYS87C, LYS88C, LYS8B, LYS99C, MET65B, MET80B, MET80C, PHE10B, PHE36B, PHE46C, PHE82B, PHE82C, PRO30C, PRO71B, THR102C, THR19B, THR28B, THR28C, THR47C, THR63B, THR89C, TRP59B, TYR48C, TYR67B, TYR97C, VAL11B, VAL20B, VAL3B
• B-D: ALA101B, ALA15D, ALA83B, ALA96B, ARG38D, ARG91B, ASN103B, ASN31B, ASN31D, ASN70D, ASP2D, ASP93B, CYS14D, CYS17B, CYS17D, GLN12D, GLN16B, GLN16D, GLU104B, GLU21D, GLU4D, GLU61D, GLU62D, GLU66D, GLU69D, GLU90B, GLU92B, GLY1D, GLY29B, GLY34D, GLY45B, GLY6D, GLY84B, HIS18D, HIS26B, HIS33D, ILE81B, ILE81D, ILE85B, ILE95B, ILE9D, LEU32D, LEU35D, LEU64D, LEU68D, LEU94B, LEU98B, LYS100B, LYS13D, LYS22D, LYS25B, LYS27B, LYS5D, LYS60D, LYS72B, LYS72D, LYS73D, LYS79B, LYS79D, LYS7D, LYS86B, LYS87B, LYS88B, LYS8D, LYS99B, MET65D, MET80B, MET80D, PHE10D, PHE36D, PHE46B, PHE82B, PRO30B, PRO71D, THR102B, THR19D, THR28B, THR28D, THR47B, THR63D, THR78D, THR89B, TRP59D, TYR48B, TYR67D, TYR97B, VAL11D, VAL20D, VAL3D
• B-E: ALA51B, ALA51E, ASN52B, ASN52E, ASN54B, ASN54E, ASP50B, ASP50E, GLU66B, GLU66E, GLY77B, GLY77E, ILE57E, ILE75B, ILE75E, LYS55B, LYS55E, LYS72B, LYS72E, LYS73B, LYS73E, LYS79B, LYS79E, LYS86B, PRO76B, PRO76E, THR49B, THR49E, THR78B, THR78E, TYR74B, TYR74E
• C-D: ALA101D, ALA15C, ALA83D, ALA96D, ARG38C, ARG91D, ASN103D, ASN31C, ASN31D, ASN70C, ASP2C, ASP93D, CYS14C, CYS17C, CYS17D, GLN12C, GLN16C, GLN16D, GLU104D, GLU21C, GLU4C, GLU61C, GLU62C, GLU66C, GLU69C, GLU90D, GLU92D, GLY1C, GLY29D, GLY34C, GLY45D, GLY6C, GLY84D, HIS18C, HIS26D, HIS33C, ILE81C, ILE81D, ILE85D, ILE95D, ILE9C, LEU32C, LEU35C, LEU64C, LEU68C, LEU94D, LEU98D, LYS100D, LYS13C, LYS22C, LYS25D, LYS27D, LYS5C, LYS60C, LYS72C, LYS72D, LYS73C, LYS79C, LYS79D, LYS7C, LYS86D, LYS87D, LYS88D, LYS8C, LYS99D, MET65C, MET80C, MET80D, PHE10C, PHE36C, PHE46D, PHE82D, PRO30D, PRO71C, THR102D, THR19C, THR28C, THR28D, THR47D, THR63C, THR78C, THR89D, TRP59C, TYR67C, TYR97D, VAL11C, VAL20C, VAL3C
• C-F: ASN70C, ASN70F, GLU69C, LYS73C, LYS73F
• D-E: ASN70D, ASN70E, GLU69D, GLU69E, LYS73D, LYS73E
• D-F: ALA51D, ALA51F, ASN52D, ASN52F, ASN54D, ASN54F, ASP50D, ASP50F, GLU66D, GLU66F, GLY77D, GLY77F, ILE75D, ILE75F, LYS55D, LYS55F, LYS72D, LYS72F, LYS73D, LYS73F, LYS79D, LYS79F, LYS86F, PRO76D, PRO76F, THR49D, THR49F, THR78D, THR78F, TYR74D, TYR74F
• E-F: ALA101F, ALA15E, ALA83F, ALA96F, ARG38E, ARG91F, ASN103F, ASN31E, ASN31F, ASN70E, ASP2E, ASP93F, CYS14E, CYS17E, CYS17F, GLN12E, GLN16E, GLN16F, GLU104F, GLU21E, GLU4E, GLU61E, GLU62E, GLU66E, GLU69E, GLU90F, GLU92F, GLY1E, GLY29F, GLY34E, GLY37E, GLY45F, GLY6E, GLY84F, HIS18E, HIS26F, HIS33E, ILE81E, ILE81F, ILE85F, ILE95F, ILE9E, LEU32E, LEU35E, LEU64E, LEU68E, LEU94F, LEU98F, LYS100F, LYS13E, LYS22E, LYS25F, LYS27F, LYS5E, LYS60E, LYS72E, LYS72F, LYS73E, LYS79E, LYS79F, LYS7E, LYS86F, LYS87F, LYS88F, LYS8E, LYS99F, MET65E, MET80E, MET80F, PHE10E, PHE36E, PHE46F, PHE82F, PRO30F, PRO71E, THR102F, THR19E, THR28E, THR28F, THR47F, THR63E, THR89F, TRP59E, TYR67E, TYR97F, VAL11E, VAL20E, VAL3E