3N97

rna polymerase alpha c-terminal domain (e. coli) and sigma region 4 (t. aq. mutant) bound to (up,-35 element) dna

• Total interactions analyzed: 15
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 53
  • Norm. En. per Res.: -2.4798
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-D	0.0	-3.4333	-127.996	-131.4293	53	4	4	5954	2	31	37
A-B	0.0	-23.1741	-10.7519	-33.926	14	0	0	426	1	16	3
B-C	-11.6055	-6.8286	-25.0983	-43.5324	25	1	0	1397	0	7	12

Interface residues

• A-D: ALA381A, ALA381D, ALA419A, ALA419D, ARG387A, ARG387D, ARG394A, ARG394D, ARG421A, ARG421D, ARG424A, ARG424D, ASN417A, ASP392A, ASP392D, GLU380A, GLU380D, GLU395A, GLU395D, GLU416A, GLU416D, GLY389A, GLY389D, GLY393A, GLY393D, HIS396D, HIS425A, ILE391A, ILE391D, LEU376A, LEU376D, LEU384A, LEU384D, LEU390A, LEU390D, LEU420A, LEU420D, LEU423A, LEU423D, LYS385A, LYS385D, LYS388A, LYS388D, LYS422A, LYS422D, MET382A, MET382D, MET386A, MET386D, PRO426A, SER374A, VAL383A, VAL383D
• A-B: ARG310B, ASP258B, ASP259B, GLU261B, HIS425A, LEU260B, LYS271B, LYS375A, LYS418A, LYS422A, PRO256B, PRO426A, VAL257B, VAL264B
• B-C: ALA272B, ARG265B, ARG265C, ASN294B, ASP305C, GLU261C, GLU288B, GLU302C, GLY296B, LEU262C, LEU289B, LEU290B, LEU295B, LEU300B, LYS291B, LYS297B, LYS298C, PRO293B, SER266C, SER299B, SER299C, THR263C, THR292B, THR301C, VAL264C