3N4M

e. coli rna polymerase alpha subunit c-terminal domain in complex with cap and dna

• Total interactions analyzed: 10
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 38
  • Norm. En. per Res.: -2.5272
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-15.6797	24.1316	-104.487	-96.0351	38	19	0	3914	0	12	12
A-C	0.0	0.0	-0.0004	-0.0004	2	0	0	1	0	0	3
B-C	-9.273	-6.9695	-28.071	-44.3135	24	2	0	1472	0	5	12

Interface residues

• A-B: ALA156A, ARG209A, ARG284B, ARG317B, ASP155A, ASP161A, GLN164A, GLN283B, GLU286B, GLU288B, GLY162A, GLY207A, GLY315B, HIS159A, ILE165A, LEU289B, LEU290B, LEU300B, LEU314B, LEU318B, LYS291B, LYS304B, LYS44A, MET157A, MET163A, MET316B, PRO154A, PRO160A, SER313B, THR158A, THR202A, THR208A, THR285B, THR301B, TYR206A, VAL204A, VAL282B, VAL287B
• A-C: LYS166A, LYS297C
• B-C: ARG265C, ASN294B, ASP305C, CYS269B, GLU261C, GLU273B, GLU288B, GLU302C, GLY296B, LEU262C, LEU289B, LEU290B, LEU295B, LEU300B, LYS291B, LYS297B, LYS298C, PRO293B, SER266C, SER299C, THR263C, THR292B, THR301C, VAL264C