3N09
atomic model of an infectious rotavirus particle
Total interactions analyzed 105
Total true interactions 40
Strongest Interaction Chains K-M
Int. Res. 55
Norm. En. per Res. -3.1321
Hub Node B(9)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -26.3576 -20.9587 -232.105 -279.4213 149 52 0 13841 2 55 41
A-F 0.0 0.0 -22.6056 -22.6056 29 4 0 1304 0 1 2
A-G 0.0 0.0 20.7461 20.7461 51 30 2 3670 0 2 1
A-J 0.0 0.0 -0.0076 -0.0076 4 0 0 7 0 0 1
A-K 0.0 0.0 -4.1389 -4.1389 26 0 0 407 0 0 2
B-D -6.2186 0.0 -38.8786 -45.0972 44 0 1 2364 0 0 1
B-F 0.0 0.0 -0.0116 -0.0116 3 0 0 9 0 0 0
B-H 0.0 0.0 7.567 7.567 52 31 0 4929 0 2 1
B-I -4.4731 7.3564 -146.969 -144.0857 97 32 3 9012 2 7 7
B-J 0.0 0.0 -73.9033 -73.9033 49 14 0 4659 0 4 3
B-K 0.0 0.0 -3.7609 -3.7609 17 0 0 261 2 3 2
B-L -5.3417 0.0 -74.7729 -80.1146 48 29 1 4079 0 1 2
B-M 0.0 0.0 -29.339 -29.339 47 3 0 2418 0 1 6
B-N 0.0 0.0 -75.665 -75.665 62 18 0 4083 0 7 5
C-D -67.3205 -61.8772 -597.8 -726.9977 241 18 13 25068 12 70 63
C-E -50.8305 -72.6489 -577.742 -701.2213 242 23 13 24713 10 68 64
C-L -11.9974 -62.4437 -33.2494 -107.6905 57 6 0 2057 3 24 15
C-N 0.0 -6.3612 -71.5597 -77.9209 66 1 0 3737 1 12 15
D-E -57.0291 -53.19 -591.76 -701.9791 245 35 13 25651 12 69 66
D-L -4.8954 41.5617 -31.4112 5.2551 20 10 1 1383 0 6 10
D-N 0.0 0.0 -2.4553 -2.4553 19 0 0 234 0 11 3
F-G -57.1056 -66.0286 -600.924 -724.0582 242 22 13 25005 12 70 64
F-H -53.3697 -71.8054 -584.314 -709.4891 242 24 13 24824 10 68 64
G-H -62.4882 -78.0106 -586.029 -726.5278 241 33 13 24992 12 69 66
G-I -6.6694 -19.1082 -63.1327 -88.9103 66 3 0 3538 2 17 18
G-J 0.0 -2.6707 -2.2788 -4.9495 17 0 0 247 0 13 5
H-I 0.0 -48.3933 -26.7761 -75.1694 46 4 0 1537 3 20 15
H-J -16.0643 47.9866 -44.9627 -13.0404 24 25 1 1794 0 6 10
I-J -62.8696 -61.8575 -592.433 -717.1601 241 22 13 24580 12 70 63
I-K -53.3459 -71.7718 -583.292 -708.4096 241 22 13 24867 10 68 64
I-L 0.0 -2.5538 -2.3515 -4.9053 17 0 0 263 0 12 5
I-M -7.7593 49.2432 -33.2701 8.2138 23 20 1 1708 0 6 10
J-K -67.1633 -78.0525 -580.505 -725.7207 241 30 13 24921 12 69 66
K-L -20.9491 -7.2934 9.6737 -18.5688 77 25 0 4616 1 19 18
K-M -37.0126 -106.1641 -29.09 -172.2667 55 6 0 2266 5 26 17
L-M -57.1644 -61.8674 -588.296 -707.3278 240 18 13 24622 12 70 64
L-N -56.2462 -71.779 -556.165 -684.1901 227 24 13 23403 9 57 56
M-N -56.9692 -78.0532 -415.274 -550.2964 187 25 10 17516 11 51 53
M-O -6.2397 -11.2174 6 ARG106M, ARG117M, ASP90O, GLU352O, GLU79O, LYS125M
N-O 0.0 48.9779 6 ASP74N, ASP74O, GLU20N, GLU20O, GLU79N, GLU79O