3MM0

crystal structure of chimeric avidin

• Total interactions analyzed: 66
• Total true interactions: 26
• Strongest Interaction:
  • Chains: E-H
  • Int. Res.: 145
  • Norm. En. per Res.: -4.0609
• Hub Node: A(6)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-43.8533	-43.8533	25	1	2	1707	0	2	3
A-C	-12.9836	6.7387	-143.342	-149.5869	64	5	1	5986	1	10	19
A-D	-32.1195	-19.8852	-511.996	-564.0007	151	40	11	21217	2	19	26
A-F	-41.4303	-8.5147	-69.9966	-119.9416	39	4	0	2415	0	5	5
A-G	0.0	54.5446	-13.8037	40.7409	13	5	0	583	0	0	7
A-H	0.0	0.0	-0.5844	-0.5844	6	0	0	78	0	1	1
B-C	-38.4531	-50.0888	-507.257	-595.7989	150	51	10	21988	4	20	24
B-D	-17.7197	3.9859	-153.833	-167.5668	65	5	1	6218	0	10	19
B-G	0.0	0.0	-0.3475	-0.3475	5	0	0	57	0	2	1
B-N	-3.9423	-3.4237	1.6118	-5.7542	14	3	0	472	0	10	2
C-D	0.0	0.0	-45.8865	-45.8865	25	3	2	1836	0	2	3
C-N	0.0	15.6537	-7.0517	8.602	9	1	0	309	0	0	3
D-F	0.0	22.2009	-8.0235	14.1775	12	0	0	323	0	1	7
D-G	-2.3107	-23.3568	-33.2754	-58.9429	31	0	0	1497	0	11	8
D-N	0.0	0.0	-0.0124	-0.0124	2	0	0	12	0	0	0
E-F	0.0	0.0	-53.3214	-53.3214	25	0	2	1861	0	2	3
E-G	-19.6036	25.5096	-148.39	-142.484	62	5	1	6027	0	10	19
E-H	-27.7687	-50.6142	-510.454	-588.8369	145	32	9	20560	3	17	21
E-I	0.0	0.0	-0.484	-0.484	4	0	0	71	0	2	1
F-G	-40.1039	-51.6527	-505.577	-597.3336	149	42	11	20905	3	23	25
F-H	-29.4645	10.1893	-144.066	-163.3412	65	11	1	5965	0	10	19
G-H	0.0	0.0	-55.1002	-55.1002	26	0	2	1857	0	2	3
H-I	0.0	-16.3044	-22.7435	-39.0479	17	2	0	1146	0	13	4
H-K	0.0	0.0	-0.0864	-0.0864	7	0	0	38	0	1	0
I-K	-26.2636	5.0815	-140.68	-161.8621	65	7	1	6102	0	10	19
M-N	-6.2667	0.0	-55.3762	-61.6429	25	1	2	1893	0	2	3

Interface residues

• A-B: ARG114A, ASN118A, ASN118B, ASP13A, ASP13B, GLY116A, GLY116B, ILE119A, ILE119B, LEU14A, LEU14B, LEU98A, LEU98B, LYS94A, LYS94B, MET96A, MET96B, THR95A, THR95B, TRP97A, TRP97B, TYR117A, TYR117B, VAL115A, VAL115B
• A-C: ALA112A, ALA112C, ALA36A, ALA36C, ALA38A, ALA38C, ARG100A, ARG100C, ARG114A, ARG114C, ASN118A, ASN118C, ASN40A, ASN40C, ASP108A, ASP108C, ASP109A, ASP109C, ASP13A, ASP13C, ASP39A, ASP39C, GLY107A, GLY107C, GLY116A, GLY116C, ILE106A, ILE106C, ILE44A, ILE44C, LEU14A, LEU14C, LEU98A, LEU98C, LEU99A, LEU99C, LYS111A, LYS111C, MET96A, MET96C, PHE72A, PRO41A, PRO41C, SER101A, SER101C, THR113A, THR113C, THR35A, THR35C, THR77A, THR77C, TRP110A, TRP110C, TRP70A, TRP70C, TRP97A, TRP97C, TYR117A, TYR117C, VAL103C, VAL115A, VAL115C, VAL37A, VAL37C
• A-D: ALA112A, ALA112D, ALA59A, ALA59D, ARG100A, ARG100D, ARG114A, ARG114D, ARG26A, ARG26D, ARG58A, ARG58D, ARG87D, ASN104A, ASN104D, ASN118A, ASN118D, ASN24A, ASN24D, ASN69A, ASN69D, ASP105A, ASP105D, ASP108A, ASP108D, ASP109A, ASP109D, ASP86D, CYS83A, CYS83D, GLN53A, GLN53D, GLN61A, GLN61D, GLN82A, GLN82D, GLU28A, GLU28D, GLU74A, GLU74D, GLU91A, GLU91D, GLY107A, GLY107D, GLY116A, GLY116D, GLY27A, GLY27D, GLY31A, GLY31D, GLY51A, GLY51D, GLY65A, GLY65D, GLY81A, GLY81D, HIS54A, HIS54D, ILE106A, ILE106D, ILE119A, ILE119D, ILE52A, ILE52D, ILE85A, ILE85D, LEU49A, LEU49D, LEU50A, LEU50D, LEU93A, LEU93D, LEU98A, LEU98D, LEU99A, LEU99D, LYS111A, LYS57A, LYS57D, LYS71A, LYS71D, LYS90A, LYS90D, LYS94A, LYS94D, MET96A, MET96D, PHE29A, PHE29D, PHE64A, PHE64D, PHE66A, PHE66D, PHE72A, PHE72D, PHE79A, PHE79D, PHE84A, PHE84D, PRO48A, PRO48D, PRO62A, PRO62D, SER101A, SER101D, SER102A, SER102D, SER25A, SER25D, SER47A, SER47D, SER60D, SER73A, SER73D, SER75A, SER75D, THR113A, THR113D, THR30A, THR30D, THR32D, THR63A, THR63D, THR67A, THR67D, THR76A, THR76D, THR77A, THR77D, THR80A, THR80D, THR95A, THR95D, TRP110A, TRP110D, TRP70A, TRP70D, TRP97A, TRP97D, TYR117A, TYR117D, VAL103A, VAL103D, VAL115A, VAL115D, VAL68A, VAL68D, VAL78A, VAL78D, VAL92A, VAL92D
• A-F: ALA59A, ARG26A, ARG58A, ASN104F, ASN24A, ASN40F, ASN43F, ASN69F, ASP105F, CYS4A, CYS83A, GLN53A, GLN61A, GLN82A, GLU74F, GLY27A, GLY42F, HIS54A, ILE44F, ILE85A, LYS57A, LYS71F, PHE72F, PHE84A, PRO41F, PRO48F, PRO62A, SER101F, SER102F, SER25A, SER47F, SER5A, SER60A, SER73F, SER75F, THR45F, TRP70F, VAL103F, VAL23A
• A-G: ALA59A, ALA59G, ARG58A, ARG58G, GLN61A, GLN61G, HIS54A, HIS54G, LYS57A, LYS57G, PRO62A, SER60A, THR63A
• A-H: ASN40H, ASN43H, ASP39H, GLY42H, GLY89A, PRO41H
• B-C: ALA112B, ALA112C, ALA59B, ALA59C, ARG100B, ARG100C, ARG114B, ARG114C, ARG26B, ARG26C, ARG58B, ARG58C, ARG87C, ASN104B, ASN104C, ASN118C, ASN24B, ASN24C, ASN69B, ASN69C, ASN88C, ASP105B, ASP105C, ASP108B, ASP108C, ASP109B, ASP109C, CYS83B, CYS83C, GLN53B, GLN53C, GLN61B, GLN61C, GLN82B, GLN82C, GLU28B, GLU28C, GLU74B, GLU74C, GLU91B, GLY107B, GLY107C, GLY116B, GLY116C, GLY27B, GLY27C, GLY31B, GLY31C, GLY51B, GLY51C, GLY65B, GLY65C, GLY81B, GLY81C, HIS54B, HIS54C, ILE106B, ILE106C, ILE119B, ILE119C, ILE52B, ILE52C, ILE85B, ILE85C, LEU49B, LEU49C, LEU50B, LEU50C, LEU93B, LEU93C, LEU98B, LEU98C, LEU99B, LEU99C, LYS111C, LYS57B, LYS57C, LYS71B, LYS71C, LYS90B, LYS90C, LYS94B, LYS94C, MET96B, MET96C, PHE29B, PHE29C, PHE64B, PHE64C, PHE66B, PHE66C, PHE72B, PHE72C, PHE79B, PHE79C, PHE84B, PHE84C, PRO48B, PRO48C, PRO62B, PRO62C, SER101B, SER101C, SER102B, SER102C, SER25B, SER25C, SER47B, SER47C, SER60B, SER60C, SER73B, SER73C, SER75B, SER75C, THR113B, THR113C, THR30B, THR30C, THR32B, THR63B, THR63C, THR67B, THR67C, THR76B, THR76C, THR77B, THR77C, THR80B, THR80C, THR95B, THR95C, TRP110B, TRP110C, TRP70B, TRP70C, TRP97B, TRP97C, TYR117B, TYR117C, VAL103B, VAL103C, VAL115B, VAL115C, VAL68B, VAL68C, VAL78B, VAL78C, VAL92B, VAL92C
• B-D: ALA112B, ALA112D, ALA36B, ALA36D, ALA38B, ALA38D, ARG100B, ARG100D, ARG114B, ARG114D, ASN118B, ASN118D, ASN40B, ASN40D, ASP108B, ASP108D, ASP109B, ASP109D, ASP13B, ASP13D, ASP39B, ASP39D, GLY107B, GLY107D, GLY116B, GLY116D, ILE106B, ILE106D, ILE44B, ILE44D, LEU14B, LEU14D, LEU98B, LEU98D, LEU99B, LEU99D, LYS111B, LYS111D, MET96B, PHE72B, PHE72D, PRO41B, PRO41D, SER101B, SER101D, SER75B, THR113B, THR113D, THR35B, THR35D, THR77B, THR77D, TRP110B, TRP110D, TRP70B, TRP70D, TRP97B, TRP97D, TYR117B, TYR117D, VAL103D, VAL115B, VAL115D, VAL37B, VAL37D
• B-G: ARG87G, ASN40B, ASP86G, GLY42B, PRO41B
• B-N: ALA59N, ARG26N, ASN104B, ASN24N, ASP105B, ASP108B, GLU28N, GLY107B, GLY27N, HIS54N, LYS111B, LYS57N, SER25N, VAL103B
• C-D: ARG114D, ASN118C, ASN118D, ASP13C, ASP13D, GLY116C, GLY116D, ILE119C, ILE119D, LEU14C, LEU14D, LEU98C, LEU98D, LYS94C, LYS94D, MET96C, MET96D, THR95C, THR95D, TRP97C, TRP97D, TYR117C, TYR117D, VAL115C, VAL115D
• C-N: ALA59N, ARG87C, GLN53N, GLY27N, HIS54N, ILE52N, LYS57N, PRO62N, THR63N
• D-F: ASN104D, ASN104F, ASP105D, ASP105F, GLU74D, GLU74F, ILE106D, ILE106F, SER102D, SER102F, VAL103D, VAL103F
• D-G: ALA59G, ARG58G, ARG87G, ASN104D, ASN40D, ASN43D, ASN69D, ASP105D, ASP108D, ASP39D, CYS4G, CYS83G, GLN61G, GLN82G, GLU74D, GLY42D, HIS54G, ILE85G, LYS111D, LYS3G, LYS57G, LYS71D, PHE72D, PHE84G, SER102D, SER25G, SER60G, SER73D, SER75D, TRP70D, VAL103D
• D-N: LYS3N, PRO41D
• E-F: ARG114E, ASN118E, ASN118F, ASP13E, ASP13F, GLY116E, GLY116F, ILE119E, ILE119F, LEU14E, LEU14F, LEU98E, LEU98F, LYS94E, LYS94F, MET96E, MET96F, THR95E, THR95F, TRP97E, TRP97F, TYR117E, TYR117F, VAL115E, VAL115F
• E-G: ALA112E, ALA112G, ALA36E, ALA38E, ALA38G, ARG100E, ARG114E, ARG114G, ASN118E, ASN118G, ASN40E, ASN40G, ASP108E, ASP108G, ASP109E, ASP109G, ASP13E, ASP13G, ASP39E, ASP39G, GLY107E, GLY107G, GLY116E, GLY116G, ILE106E, ILE106G, ILE44E, ILE44G, LEU14E, LEU14G, LEU98E, LEU98G, LEU99E, LEU99G, LYS111E, LYS111G, MET96G, PHE72E, PHE72G, PRO41E, PRO41G, SER101E, SER101G, THR113E, THR113G, THR35E, THR35G, THR77E, THR77G, TRP110E, TRP110G, TRP70E, TRP70G, TRP97E, TRP97G, TYR117E, TYR117G, VAL103G, VAL115E, VAL115G, VAL37E, VAL37G
• E-H: ALA112E, ALA112H, ALA59E, ALA59H, ARG100E, ARG100H, ARG114E, ARG114H, ARG26E, ARG26H, ARG58E, ARG58H, ASN104E, ASN104H, ASN24E, ASN24H, ASN69E, ASN69H, ASP105E, ASP105H, ASP108E, ASP108H, ASP109E, ASP109H, CYS83E, CYS83H, GLN53E, GLN53H, GLN61E, GLN61H, GLN82E, GLN82H, GLU28E, GLU28H, GLU74E, GLU74H, GLU91E, GLU91H, GLY107E, GLY107H, GLY116E, GLY116H, GLY27E, GLY27H, GLY31E, GLY31H, GLY51E, GLY51H, GLY65E, GLY65H, GLY81E, GLY81H, HIS54E, HIS54H, ILE106E, ILE106H, ILE119E, ILE119H, ILE52E, ILE52H, ILE85E, ILE85H, LEU49E, LEU49H, LEU50E, LEU50H, LEU93E, LEU93H, LEU98E, LEU98H, LEU99E, LEU99H, LYS57E, LYS57H, LYS71E, LYS71H, LYS90E, LYS90H, LYS94E, LYS94H, MET96E, MET96H, PHE29E, PHE29H, PHE64E, PHE64H, PHE66E, PHE66H, PHE72E, PHE72H, PHE79E, PHE79H, PHE84E, PHE84H, PRO48E, PRO48H, PRO62E, PRO62H, SER101E, SER101H, SER102E, SER102H, SER25H, SER47E, SER47H, SER60E, SER60H, SER73E, SER73H, SER75E, SER75H, THR113E, THR113H, THR30E, THR30H, THR63E, THR63H, THR67E, THR67H, THR76E, THR76H, THR77E, THR77H, THR80E, THR80H, THR95E, THR95H, TRP110E, TRP110H, TRP70E, TRP70H, TRP97E, TRP97H, TYR117E, TYR117H, VAL103E, VAL103H, VAL115E, VAL115H, VAL68E, VAL68H, VAL78E, VAL78H, VAL92E, VAL92H
• E-I: ASN104I, ASP105I, ILE106I, LYS71E
• F-G: ALA112F, ALA112G, ALA59F, ALA59G, ARG100F, ARG100G, ARG114F, ARG114G, ARG26F, ARG26G, ARG58F, ARG58G, ARG87F, ARG87G, ASN104F, ASN104G, ASN24F, ASN24G, ASN69F, ASN69G, ASP105F, ASP105G, ASP108F, ASP108G, ASP109F, ASP109G, ASP86F, ASP86G, CYS83F, CYS83G, GLN53F, GLN53G, GLN61F, GLN61G, GLN82F, GLN82G, GLU28F, GLU28G, GLU74F, GLU74G, GLU91F, GLU91G, GLY107F, GLY107G, GLY116F, GLY116G, GLY27F, GLY27G, GLY31F, GLY31G, GLY51F, GLY51G, GLY65F, GLY65G, GLY81F, GLY81G, HIS54F, HIS54G, ILE106F, ILE106G, ILE119F, ILE119G, ILE52F, ILE52G, ILE85F, ILE85G, LEU49F, LEU49G, LEU50F, LEU50G, LEU93F, LEU93G, LEU98F, LEU98G, LEU99F, LEU99G, LYS57F, LYS57G, LYS71F, LYS71G, LYS90F, LYS90G, LYS94F, LYS94G, MET96F, MET96G, PHE29F, PHE29G, PHE64F, PHE64G, PHE66F, PHE66G, PHE72F, PHE72G, PHE79F, PHE79G, PHE84F, PHE84G, PRO48F, PRO48G, PRO62F, PRO62G, SER101F, SER101G, SER102F, SER102G, SER25F, SER47F, SER47G, SER60F, SER60G, SER73F, SER73G, SER75F, SER75G, THR113F, THR113G, THR30F, THR30G, THR63F, THR63G, THR67F, THR67G, THR76F, THR76G, THR77F, THR77G, THR80F, THR80G, THR95F, THR95G, TRP110F, TRP110G, TRP70F, TRP70G, TRP97F, TRP97G, TYR117F, TYR117G, VAL103F, VAL103G, VAL115F, VAL115G, VAL68F, VAL68G, VAL78F, VAL78G, VAL92F, VAL92G
• F-H: ALA112F, ALA112H, ALA36F, ALA36H, ALA38F, ALA38H, ARG100F, ARG100H, ARG114F, ARG114H, ASN118F, ASN118H, ASN40F, ASN40H, ASP108F, ASP108H, ASP109F, ASP109H, ASP13F, ASP39F, ASP39H, GLY107F, GLY107H, GLY116F, GLY116H, ILE106F, ILE106H, ILE44F, ILE44H, LEU14F, LEU14H, LEU98F, LEU98H, LEU99F, LEU99H, LYS111F, LYS111H, MET96F, MET96H, PHE72F, PHE72H, PRO41F, PRO41H, SER101F, SER101H, SER75H, THR113F, THR113H, THR35F, THR35H, THR77F, THR77H, TRP110F, TRP110H, TRP70F, TRP70H, TRP97F, TRP97H, TYR117F, TYR117H, VAL103H, VAL115F, VAL115H, VAL37F, VAL37H
• G-H: ARG114G, ASN118G, ASN118H, ASP13G, ASP13H, GLY116G, GLY116H, ILE119G, ILE119H, LEU14G, LEU14H, LEU93H, LEU98G, LEU98H, LYS94G, LYS94H, MET96G, MET96H, THR95G, THR95H, TRP97G, TRP97H, TYR117G, TYR117H, VAL115G, VAL115H
• H-I: ALA59H, ARG26H, ARG58H, ASN104I, ASN24H, ASP105I, ASP108I, ASP109I, GLU28H, GLY107I, GLY27H, HIS54H, ILE106I, LYS111I, LYS57H, SER25H, VAL103I
• H-K: ALA36K, GLY15K, LEU14K, LYS3H, LYS57H, PRO41K, VAL23H
• I-K: ALA112I, ALA112K, ALA36I, ALA36K, ALA38I, ALA38K, ARG100I, ARG100K, ARG114I, ARG114K, ASN118I, ASN118K, ASN12I, ASN40I, ASN40K, ASP108I, ASP108K, ASP109I, ASP109K, ASP13I, ASP13K, ASP39I, ASP39K, GLY107I, GLY107K, GLY116I, GLY116K, ILE106I, ILE106K, ILE44I, ILE44K, LEU14I, LEU14K, LEU98I, LEU98K, LEU99I, LEU99K, LYS111I, LYS111K, MET96K, PHE72I, PHE72K, PRO41I, PRO41K, SER101I, SER101K, THR113I, THR113K, THR35I, THR35K, THR77I, THR77K, TRP110I, TRP110K, TRP70I, TRP70K, TRP97I, TRP97K, TYR117I, TYR117K, VAL103K, VAL115I, VAL115K, VAL37I, VAL37K
• M-N: ARG114N, ASN118M, ASN118N, ASP13M, ASP13N, GLY116M, GLY116N, ILE119M, ILE119N, LEU14M, LEU14N, LEU98M, LEU98N, LYS94M, LYS94N, MET96M, MET96N, THR95M, THR95N, TRP97M, TRP97N, TYR117M, TYR117N, VAL115M, VAL115N