3MKS

crystal structure of yeast cdc4/skp1 in complex with an allosteric inhibitor scf-i2

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 102
  • Norm. En. per Res.: -4.7844
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-29.2484	-57.5674	-334.275	-421.0908	102	20	12	15109	2	31	28
B-C	-5.426	-12.9617	-89.5005	-107.8882	57	3	0	4122	2	25	18
C-D	-57.3622	-58.1082	-372.541	-488.0114	102	21	12	15907	1	26	22

Interface residues

• A-B: ALA114A, ALA137A, ALA138A, ALA149A, ALA155A, ARG159A, ARG161A, ARG167A, ARG168A, ARG185A, ARG272B, ARG310B, ARG352B, ARG83A, ASN139A, ASN171A, ASN174A, ASN288B, ASN297B, ASN304B, ASN306B, ASP127A, ASP148A, ASP175A, ASP273B, ASP294B, ASP349B, CYS151A, GLN128A, GLN291B, GLN303B, GLU129A, GLU133A, GLU156A, GLU164A, GLU165A, GLU180A, GLU181A, GLU281B, GLU293B, GLY150A, GLY160A, GLY300B, ILE134A, ILE135A, ILE158A, ILE166A, ILE172A, ILE184A, ILE275B, ILE282B, ILE286B, ILE295B, ILE296B, ILE309B, LEU131A, LEU136A, LEU146A, LEU147A, LEU270B, LEU274B, LEU278B, LEU284B, LEU290B, LEU299B, LEU345B, LEU353B, LEU356B, LYS112A, LYS144A, LYS152A, LYS271B, LYS285B, LYS307B, MET130A, MET157A, PHE170A, PHE176A, PHE287B, PRO115A, PRO145A, PRO163A, PRO279B, SER113A, SER162A, SER277B, SER283B, SER298B, SER302B, SER322B, THR169A, THR177A, THR276B, TRP305B, TYR132A, TYR140A, TYR289B, VAL126A, VAL153A, VAL154A, VAL173A, VAL301B
• B-C: ALA94C, ARG15C, ARG350B, ARG98C, ASN101C, ASN332B, ASN335B, ASN476B, ASN5C, ASP19C, ASP349B, ASP99C, GLN340B, GLN347B, GLN348B, GLN88C, GLU122C, GLU12C, GLU14C, GLU473B, GLU92C, GLU95C, GLY433B, HIS432B, HIS96C, ILE22C, ILE91C, LEU336B, LEU338B, LEU345B, LEU351B, LEU87C, LEU8C, LYS337B, LYS341B, LYS344B, LYS451B, LYS496B, PHE16C, PHE331B, PRO343B, SER100C, SER10C, SER118C, SER333B, SER339B, SER346B, SER4C, SER84C, SER85C, THR17C, THR313B, TRP119C, TYR342B, VAL18C, VAL6C, VAL7C
• C-D: ALA137C, ALA138C, ALA149C, ALA155C, ALA183C, ARG159C, ARG161C, ARG167C, ARG168C, ARG185C, ARG186C, ARG272D, ARG310D, ARG352D, ARG83C, ASN139C, ASN171C, ASN174C, ASN269D, ASN288D, ASN297D, ASN304D, ASN306D, ASP127C, ASP148C, ASP175C, ASP273D, ASP294D, CYS151C, GLN128C, GLN291D, GLN303D, GLU129C, GLU133C, GLU156C, GLU164C, GLU165C, GLU179C, GLU180C, GLU181C, GLU281D, GLU293D, GLY150C, GLY160C, GLY300D, ILE134C, ILE135C, ILE158C, ILE166C, ILE172C, ILE184C, ILE275D, ILE282D, ILE286D, ILE295D, ILE296D, ILE309D, LEU131C, LEU136C, LEU146C, LEU147C, LEU270D, LEU274D, LEU278D, LEU284D, LEU290D, LEU299D, LEU353D, LEU356D, LYS144C, LYS152C, LYS271D, LYS285D, LYS307D, MET130C, MET157C, PHE170C, PHE176C, PHE287D, PHE292D, PRO115C, PRO145C, PRO163C, PRO279D, SER162C, SER277D, SER283D, SER298D, SER302D, THR169C, THR177C, THR276D, TRP305D, TYR132C, TYR140C, TYR289D, VAL116C, VAL126C, VAL153C, VAL154C, VAL173C, VAL301D