3MD2

crystal structure of the matrix protein 1 from influenza a virus (a/california/04/2009 (h1n1))

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 60
  • Norm. En. per Res.: -3.279
• Hub Node: B(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-D	-20.0027	-37.86	-138.88	-196.7427	60	11	1	6818	4	24	13
B-C	-19.8899	-37.5922	-137.319	-194.8011	60	8	1	6760	4	24	13
B-D	-2.4286	-3.2628	-13.8923	-19.5837	27	2	0	905	0	3	5

Interface residues

• A-D: ALA96A, ALA96D, ARG105A, ARG105D, ARG134A, ARG134D, ARG77A, ARG77D, ARG78A, ARG78D, ARG95A, ARG95D, ASN133A, ASN133D, ASN82A, ASN82D, ASN85A, ASN85D, ASN91A, ASN91D, ASN92A, ASN92D, ASP89A, ASP89D, ASP94A, ASP94D, GLN81A, GLN81D, GLY129A, GLY129D, ILE131A, ILE131D, LEU130A, LEU130D, LEU84A, LEU84D, LYS101A, LYS101D, LYS102A, LYS102D, LYS104A, LYS104D, LYS98A, LYS98D, MET135A, MET135D, MET93A, MET93D, PRO90A, PRO90D, SER126A, SER126D, THR137A, THR137D, TYR100A, TYR100D, TYR132A, TYR132D, VAL97A, VAL97D
• B-C: ALA96B, ALA96C, ARG105B, ARG105C, ARG134B, ARG134C, ARG77B, ARG77C, ARG78B, ARG78C, ARG95B, ARG95C, ASN133B, ASN133C, ASN82B, ASN82C, ASN85B, ASN85C, ASN91B, ASN91C, ASN92B, ASN92C, ASP89B, ASP89C, ASP94B, ASP94C, GLN81B, GLN81C, GLY129B, GLY129C, ILE131B, ILE131C, LEU130B, LEU130C, LEU84B, LEU84C, LYS101B, LYS101C, LYS102B, LYS102C, LYS104B, LYS104C, LYS98B, LYS98C, MET135B, MET135C, MET93B, MET93C, PRO90B, PRO90C, SER126B, SER126C, THR137B, THR137C, TYR100B, TYR100C, TYR132B, TYR132C, VAL97B, VAL97C
• B-D: ALA22B, ALA22D, ALA25B, ALA33B, GLN26B, GLN26D, GLU23D, GLU29B, GLU6B, GLU8B, GLY18D, ILE15D, LEU12B, LEU12D, LEU20D, LEU28B, LEU4B, LYS21D, LYS35B, PHE32B, PRO16D, PRO19D, SER13D, SER17D, THR5B, THR9B, THR9D