3M9S
crystal structure of respiratory complex i from thermus thermophilus
Total interactions analyzed 325
Total true interactions 46
Strongest Interaction Chains 4-5
Int. Res. 236
Norm. En. per Res. -4.4148
Hub Node 3(7)
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Weak Strong
Width of edge <-> No. of inter. res.
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
1-2 -128.957 -116.3351 -729.978 -975.2701 228 56 16 28611 13 77 78
1-3 -32.5905 -50.2381 -376.198 -459.0266 150 12 7 16245 4 46 55
1-7 0.0 0.8305 -19.0942 -18.2637 28 0 1 1150 0 3 17
2-3 -21.5931 61.591 -156.016 -116.0181 60 16 0 5615 1 14 19
2-7 -25.9579 -57.7623 -154.585 -238.3052 82 12 6 7334 3 27 19
3-4 -13.1161 3.4624 -268.59 -278.2437 91 24 5 10917 2 24 21
3-5 -63.5891 -11.9153 -248.269 -323.7733 101 19 2 9207 3 28 26
3-9 -14.9837 -87.521 -146.996 -249.5007 60 8 1 5849 6 30 24
3-7 -49.5058 -42.8011 -208.052 -300.359 89 22 4 8918 12 50 60
3-C -7.6553 -42.3753 152.707 102.6764 45 27 0 1771 4 33 29
3-F -11.7767 -1.4744 -16.3474 -29.5984 57 25 0 4905 2 43 39
3-G 0.0 -9.4812 -1.7754 -11.2567 15 0 0 188 0 13 16
4-5 -203.7211 -39.3834 -798.781 -1041.8855 236 55 16 30905 17 87 82
4-6 -38.9601 -36.9771 -276.933 -352.8702 107 22 4 11645 6 18 25
4-9 -32.2967 -51.4668 -248.719 -332.4825 102 10 4 10428 2 41 20
4-7 -4.6964 -30.3492 -69.5033 -104.549 27 3 1 2606 3 9 13
4-R 0.0 0.0 -3.6094 -3.6094 11 0 0 391 0 0 0
4-H 0.0 0.0 36.6588 36.6588 14 9 0 425 0 0 0
5-6 -25.3716 -5.1573 -78.3932 -108.9221 48 2 1 3538 0 14 5
5-9 -12.9783 -54.0299 -163.074 -230.0821 57 10 6 6362 7 12 11
6-9 -41.5518 -20.3478 -340.778 -402.6776 122 51 14 14836 2 34 40
9-7 -3.9774 27.1323 -102.486 -79.3311 62 2 3 4771 0 23 22
L-M 0.0 0.0 -28.6758 -28.6758 102 1 0 3465 0 0 0
L-N 0.0 0.0 -15.4501 -15.4501 74 0 0 2384 0 0 0
L-R 0.0 0.0 -1.4113 -1.4113 29 0 0 435 0 0 0
M-N 0.0 0.0 -14.1078 -14.1078 63 12 0 3409 0 0 0
N-R 0.0 0.0 -11.133 -11.133 124 0 0 2543 0 0 0
R-H 0.0 0.0 11.0394 11.0394 94 4 0 2169 0 0 0
A-B -139.5529 -116.3388 -730.628 -986.5197 228 56 16 28656 13 77 78
A-C -23.1459 -50.244 -375.852 -449.2419 150 11 7 16235 4 46 55
A-J 0.0 0.8309 -19.1132 -18.2823 28 0 1 1154 0 3 17
B-C -12.7129 61.5871 -159.03 -110.1558 60 16 0 5591 1 14 19
B-J -25.9474 -57.7621 -154.534 -238.2435 82 12 6 7320 3 27 19
C-D -13.1208 3.4598 -267.615 -277.2761 91 21 5 10956 2 24 21
C-E -61.3987 -11.9131 -250.63 -323.9418 103 17 2 9188 3 28 26
C-G -14.9872 -87.518 -146.016 -248.5212 60 6 1 5854 6 30 24
C-J -49.4894 -42.7978 -211.549 -303.8362 89 16 4 8942 12 50 60
D-E -202.4355 -39.3777 -795.736 -1037.5492 236 48 16 30686 17 87 82
D-F -41.2456 -36.975 -273.58 -351.8006 107 24 4 11548 6 18 25
D-G -32.3203 -51.4634 -247.423 -331.2067 101 9 4 10438 2 41 20
D-J -4.6924 -30.3507 -69.7104 -104.7535 27 3 1 2579 3 9 13
E-F -25.3616 -5.1573 -78.6538 -109.1728 48 2 1 3559 0 14 5
E-G -22.6968 -54.0235 -160.646 -237.3663 58 12 6 6389 7 12 11
F-G -45.0983 -20.3416 -324.615 -390.0549 124 49 14 14817 2 34 40
G-J -3.9782 27.1328 -102.558 -79.4034 61 2 3 4776 0 23 22
O-P 0.0 0.0 -28.6677 -28.6677 102 1 0 3463 0 0 0