3M9D
crystal structure of the prokaryotic ubiquintin-like protein pup complexed with the hexameric proteasomal atpase mpa which includes the amino terminal coiled coil domain and the inter domain
Total interactions analyzed 153
Total true interactions 29
Strongest Interaction Chains F-J
Int. Res. 17
Norm. En. per Res. -4.2784
Hub Node B(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -32.5926 -22.3448 -366.806 -421.7434 189 15 26 19158 3 68 67
A-D -53.928 -18.5825 -195.573 -268.0835 103 36 4 9478 3 42 40
A-G -5.7497 -19.1819 -57.7476 -82.6792 45 18 0 3449 0 24 11
B-E -57.6756 -23.3001 -206.374 -287.3497 101 30 5 9741 3 39 37
B-G -4.2334 -10.2585 -61.1108 -75.6027 48 6 0 3366 1 20 19
B-J 0.0 -2.2569 -20.7147 -22.9716 23 1 1 1110 0 4 5
B-K 0.0 0.0 -0.0019 -0.0019 2 0 0 2 0 0 0
C-D -31.8389 -27.8759 -373.224 -432.9388 191 22 26 19297 5 65 67
C-F -65.0917 -19.9685 -197.148 -282.2082 101 36 4 9894 3 41 38
C-I -7.1753 -20.423 -50.9543 -78.5527 42 14 0 3133 0 21 10
D-I -6.6399 -4.3594 -59.9382 -70.9375 50 10 0 3482 1 20 18
E-F -23.7052 -18.9806 -375.48 -418.1658 190 16 26 19294 1 67 67
E-H -2.8715 -11.2076 -58.9311 -73.0102 44 8 0 3041 0 21 10
E-J -6.1633 -50.6478 -96.1689 -152.98 49 5 1 4731 4 25 25
E-K 0.0 0.0 -0.0747 -0.0747 12 0 0 33 0 0 3
F-H -4.02 -6.9665 -56.1847 -67.1712 44 5 0 3057 1 19 16
F-J -9.4818 -22.1685 -41.0824 -72.7327 17 2 0 1398 3 8 9
J-K -31.0704 -22.9647 -358.134 -412.1691 189 23 24 19044 4 64 67
J-M -50.1193 -14.6624 -203.616 -268.3976 101 32 6 9818 4 40 38
J-P -4.0847 -18.8696 -62.0281 -84.9824 43 9 0 3291 0 24 10
K-N -69.9236 -21.9768 -208.878 -300.7784 102 22 6 9800 3 38 38
K-P -10.567 5.0321 -57.0483 -62.5832 49 15 0 3680 3 21 19
L-M -28.5583 -18.6969 -368.13 -415.3852 187 30 24 19074 4 66 67
L-O -48.9523 -13.7052 -196.411 -259.0684 103 34 4 9475 4 39 38
L-R -3.9623 -17.7925 -55.5364 -77.2912 42 3 0 2978 0 22 9
M-R -4.6997 -7.4726 -49.1566 -61.3289 47 11 0 3213 1 19 19
N-O -38.6319 -19.6928 -375.663 -433.9877 186 28 25 19637 5 66 68
N-Q -2.8601 -17.2998 -62.7193 -82.8792 46 5 0 3303 0 25 10
O-Q -3.0944 0.9748 -58.2561 -60.3757 46 6 0 3205 1 20 19