3M8L

crystal structure analysis of the feline calicivirus capsid protein

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 92
  • Norm. En. per Res.: -2.834
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-27.3628	-27.8964	-205.47	-260.7292	92	22	3	8969	1	14	8
A-C	-38.6395	6.9746	-382.118	-413.783	158	36	4	16175	0	26	25
B-C	-43.6585	-8.2682	-254.093	-306.0197	130	34	5	11741	0	14	16

Interface residues

• A-B: ALA210B, ALA232A, ALA558A, ALA653A, ARG272A, ARG272B, ARG559A, ASN377B, ASN598B, ASP257A, ASP270A, ASP281B, ASP283A, ASP375B, ASP604A, GLN135B, GLN250A, GLN260A, GLN378B, GLN651A, GLU134B, GLU241A, GLU379B, GLY136B, GLY239A, GLY329B, GLY335B, GLY560A, HIS253A, HIS277A, HIS277B, HIS323B, HIS334B, ILE234A, ILE240A, ILE243A, ILE655A, LEU207B, LEU249A, LEU255A, LEU271A, LEU275A, LEU275B, LEU278B, LEU324B, LEU325B, LEU332B, LEU652A, LYS326B, LYS654A, MET248A, MET279B, MET331B, PHE219A, PHE256A, PHE266A, PHE366A, PHE376B, PRO133B, PRO237A, PRO238A, PRO242A, PRO252A, PRO327B, PRO328B, PRO414B, PRO603A, SER245A, SER247A, SER273A, SER273B, SER280B, SER330B, SER602A, SER605A, THR246A, THR274A, THR274B, THR282A, THR285A, THR333B, TYR208B, TYR251A, TYR276A, TYR276B, TYR599B, VAL209B, VAL235A, VAL236A, VAL254A, VAL264A, VAL288A
• A-C: ALA210A, ALA232C, ALA233C, ALA370A, ALA381A, ALA542C, ALA556C, ALA558C, ALA653C, ARG259C, ARG272A, ARG272C, ARG364C, ARG544C, ARG549A, ARG549C, ARG559C, ASN377A, ASN562C, ASN597A, ASN598A, ASN650C, ASP257C, ASP281A, ASP281C, ASP283C, ASP375A, ASP504A, ASP543C, ASP604C, ASP624C, ASP626C, GLN135A, GLN250C, GLN260C, GLN378A, GLN505A, GLN651C, GLU134A, GLU241C, GLU262C, GLU379A, GLU545C, GLU555C, GLY239C, GLY329A, GLY335A, GLY382A, GLY551A, GLY557C, GLY560C, GLY561C, HIS253C, HIS277A, HIS277C, HIS323A, HIS334A, HIS563C, ILE130A, ILE234C, ILE240C, ILE243C, ILE265C, ILE363C, ILE412A, ILE416A, ILE550A, ILE655C, LEU207A, LEU231C, LEU249C, LEU255C, LEU271C, LEU275A, LEU275C, LEU278A, LEU324A, LEU325A, LEU332A, LEU553A, LEU553C, LEU594A, LEU596A, LEU600A, LEU601A, LEU601C, LEU652C, LYS230C, LYS326A, LYS507A, LYS654C, MET248C, MET279A, MET331A, PHE256C, PHE266C, PHE366C, PHE368C, PHE374A, PHE376A, PHE606C, PHE630C, PRO133A, PRO237C, PRO238C, PRO242C, PRO252C, PRO269C, PRO327A, PRO328A, PRO365C, PRO414A, PRO554C, PRO564C, PRO603A, PRO603C, SER129A, SER245C, SER247C, SER273A, SER273C, SER280A, SER330A, SER336A, SER500A, SER595A, SER602A, SER602C, SER605C, SER625C, SER634C, THR131A, THR132A, THR246C, THR274A, THR274C, THR282C, THR284C, THR285C, THR333A, THR380A, THR502A, TRP383A, TYR208A, TYR251C, TYR276A, TYR292C, TYR599A, VAL209A, VAL235C, VAL236C, VAL254C, VAL261C, VAL264C, VAL367C, VAL413A, VAL552A, VAL552C
• B-C: ALA210C, ALA232B, ALA233B, ALA381C, ALA556B, ALA558B, ALA653B, ARG259B, ARG272B, ARG272C, ARG544B, ARG549B, ARG559B, ASN377C, ASN501B, ASN597C, ASN598C, ASN650B, ASP257B, ASP270B, ASP281C, ASP283B, ASP504C, ASP604B, GLN135C, GLN250B, GLN260B, GLN378C, GLN505C, GLU134C, GLU241B, GLU262B, GLU379C, GLU545B, GLU555B, GLY239B, GLY329C, GLY335C, GLY415C, GLY551C, GLY557B, HIS253B, HIS277B, HIS277C, HIS323C, HIS334C, ILE130C, ILE221B, ILE234B, ILE240B, ILE243B, ILE265B, ILE412C, ILE416C, ILE550C, ILE655B, LEU207C, LEU231B, LEU249B, LEU255B, LEU271B, LEU275B, LEU275C, LEU278C, LEU324C, LEU325C, LEU332C, LEU553B, LEU594C, LEU596C, LEU600C, LEU652B, LYS230B, LYS326C, LYS654B, MET248B, MET279C, MET331C, PHE256B, PHE266B, PHE366B, PHE368B, PRO133C, PRO237B, PRO238B, PRO242B, PRO252B, PRO263B, PRO327C, PRO328C, PRO365B, PRO414C, PRO603B, SER129C, SER245B, SER247B, SER273B, SER273C, SER330C, SER336C, SER595C, SER602B, SER605B, THR131C, THR132C, THR246B, THR274B, THR274C, THR282B, THR284B, THR285B, THR333C, THR380C, THR506C, TYR208C, TYR251B, TYR276B, TYR276C, TYR411C, TYR599C, VAL209C, VAL235B, VAL236B, VAL254B, VAL261B, VAL264B, VAL407C, VAL413C, VAL552B, VAL552C