3M7O

crystal structure of mouse md-1 in complex with phosphatidylcholine

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 59
  • Norm. En. per Res.: -3.512
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-61.2052	2.4913	-126.602	-185.316	58	6	7	5135	0	3	1
A-C	0.0	0.0	-25.2833	-25.2833	36	0	0	1405	0	6	5
A-D	-11.7375	-19.8417	-65.4881	-97.0673	49	4	0	2296	0	11	10
B-D	0.0	0.0	-23.7293	-23.7293	35	0	0	1415	0	6	5
C-D	-70.0308	2.677	-139.857	-207.2108	59	6	7	5389	0	2	1

Interface residues

• A-B: ALA89B, ASN127A, ASN127B, ASN128A, ASN128B, ASN65A, ASN65B, ASN96A, ASN96B, ASP132A, ASP132B, ASP84A, ASP84B, GLN106A, GLN61A, GLN61B, GLN63A, GLN63B, GLY130A, GLY130B, ILE62A, ILE62B, ILE85A, ILE85B, ILE94A, ILE94B, LEU131A, LEU131B, LEU83A, LEU87A, LEU87B, LEU95A, LEU95B, LYS90B, MET88B, PRO100A, PRO100B, PRO129A, PRO129B, PRO134A, PRO134B, SER64A, SER64B, SER92A, SER92B, SER93A, SER93B, SER98A, SER98B, THR86B, TYR138A, TYR138B, TYR97A, TYR97B, TYR99A, TYR99B, VAL133A, VAL133B
• A-C: ALA150A, ALA150C, ARG149A, ARG149C, ARG75A, ASN146A, ASN146C, ASN148A, ASN148C, ASN96C, ASP46A, ASP50A, ASP84C, GLN49A, GLN76A, GLU143C, GLU147A, GLU147C, GLY26A, GLY91C, ILE94C, LEU141C, LEU48A, LYS116A, LYS90C, MET88C, PHE82C, PRO28A, PRO47A, SER92C, SER93C, SER98C, THR151A, THR86C, TRP27A, TYR145C
• A-D: ALA150A, ALA150D, ARG149A, ARG149D, ASN146A, ASN146D, ASN148A, ASN148D, ASN96A, ASN96D, ASP46A, ASP46D, ASP84A, ASP84D, CYS154A, CYS154D, CYS45A, CYS45D, GLU103A, GLU143A, GLU143D, GLU147A, GLU147D, LEU101A, LEU101D, LEU81A, LEU81D, LEU83A, LEU83D, LYS80A, LYS80D, PHE82A, PHE82D, PRO100A, PRO100D, PRO47A, PRO47D, SER93A, SER93D, SER98A, SER98D, THR151A, THR151D, TYR145A, TYR145D, TYR97A, TYR97D, TYR99A, TYR99D
• B-D: ALA150B, ALA150D, ARG149B, ARG149D, ARG75D, ASN146D, ASN148B, ASN148D, ASN96B, ASP46D, ASP50D, ASP84B, GLN49D, GLN76D, GLU143B, GLU147B, GLU147D, GLY26D, GLY91B, ILE94B, LEU141B, LEU48D, LYS116D, LYS90B, MET88B, PHE82B, PRO28D, PRO47D, SER92B, SER93B, SER98B, THR151D, THR86B, TRP27D, TYR145B
• C-D: ALA89C, ASN127C, ASN127D, ASN128C, ASN128D, ASN65C, ASN65D, ASN96C, ASN96D, ASP132C, ASP132D, ASP84C, ASP84D, GLN135C, GLN61C, GLN61D, GLN63C, GLN63D, GLY130C, GLY130D, ILE62C, ILE62D, ILE85C, ILE85D, ILE94C, ILE94D, LEU131C, LEU131D, LEU83D, LEU87C, LEU87D, LEU95C, LEU95D, LYS60C, LYS90C, MET88C, PRO100C, PRO100D, PRO129C, PRO129D, PRO134C, PRO134D, SER64C, SER64D, SER92C, SER92D, SER93C, SER93D, SER98C, SER98D, THR86C, TYR138C, TYR138D, TYR97C, TYR97D, TYR99C, TYR99D, VAL133C, VAL133D