3M4O
rna polymerase ii elongation complex b
Total interactions analyzed 78
Total true interactions 22
Strongest Interaction Chains A-B
Int. Res. 761
Norm. En. per Res. -4.3042
Hub Node A(7)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -461.3963 -224.5281 -2589.6 -3275.5244 761 215 59 110305 17 269 242
A-C -6.6907 7.2432 -77.6993 -77.1468 55 2 0 3287 0 17 18
A-E -58.6444 -81.1778 -551.67 -691.4922 214 46 16 24125 8 79 66
A-F -39.2335 -38.0129 -435.57 -512.8164 157 24 16 19066 2 49 43
A-H -58.7896 2.6048 -408.619 -464.8037 143 34 12 17625 0 34 34
A-I -79.3654 -39.926 -415.248 -534.5393 147 28 8 17170 1 53 52
A-K -23.5246 -29.8806 -261.072 -314.4773 93 12 8 10475 3 24 21
B-C -86.4249 -89.4301 -510.697 -686.552 163 30 5 18634 5 59 62
B-F 0.0 0.0 -7.8756 -7.8756 16 1 0 398 0 3 6
B-H 0.0 0.0 -1.464 -1.464 3 0 0 65 0 0 0
B-I -3.2176 -50.2932 -338.864 -392.3748 135 18 2 14635 1 50 52
B-J -21.3959 -23.4663 -433.844 -478.7062 142 41 7 18815 4 35 38
B-K -6.5276 -11.7424 -77.5012 -95.7712 60 12 0 3441 2 16 20
B-L -80.253 -48.8124 -227.643 -356.7083 110 24 7 11098 6 43 44
C-H 0.0 -4.8715 -30.649 -35.5205 26 0 1 1410 0 8 6
C-J -33.8827 -60.0065 -245.708 -339.5972 111 33 11 12639 6 42 28
C-K -66.741 -39.5836 -470.865 -577.1896 151 28 15 22597 5 46 44
C-L -17.2736 -43.0281 -135.825 -196.1267 60 8 8 5372 6 23 16
E-F 0.0 -18.0227 -23.3867 -41.4094 21 2 0 1120 0 6 6
H-K 0.0 -6.0112 -31.2529 -37.2641 26 1 0 1673 0 6 6
J-L 0.0 0.0 -7.1409 -7.1409 10 0 0 354 0 0 1
K-L 0.0 8.5282 -0.822 7.7062 6 0 0 144 0 3 2