3M30
structural insight into methyl-coenzyme m reductase chemistry using coenzyme b analogues
Total interactions analyzed 15
Total true interactions 14
Strongest Interaction Chains E-F
Int. Res. 213
Norm. En. per Res. -5.6128
Hub Node A(5)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -12.4922 -14.2201 -305.438 -332.1502 125 11 3 11946 4 31 34
A-C -121.057 -97.3079 -759.171 -977.5359 199 41 6 27495 10 63 74
A-D -313.4701 -128.9328 -1618.31 -2060.713 393 62 38 58233 12 116 101
A-E -86.4886 -49.6555 -663.268 -799.4122 216 20 16 24901 3 31 21
A-F -36.1579 -44.3777 -133.418 -213.9535 67 5 2 6173 6 34 36
B-C -215.4345 -274.0556 -673.927 -1163.4171 210 27 23 26342 22 72 55
B-D -89.3063 -49.7406 -645.775 -784.8219 218 20 17 24424 3 31 21
B-E -107.5855 30.6929 -551.832 -628.7247 196 19 22 24018 0 55 43
B-F 0.0 0.0 -30.293 -30.293 22 0 1 1032 0 0 0
C-D -37.0578 -45.0493 -123.53 -205.6371 66 5 2 5767 6 31 32
C-E 0.0 0.0 -29.7128 -29.7128 22 0 1 1036 0 0 0
D-E -13.1726 -13.4724 -307.632 -334.277 125 11 3 12005 4 31 34
D-F -144.2252 -104.2429 -762.352 -1010.8201 200 38 6 27831 12 62 71
E-F -262.7714 -230.7512 -702.01 -1195.5326 213 38 24 27502 23 73 55