3LYS

crystal structure of the n-terminal domain of the prophage pi2 protein 01 (integrase) from lactococcus lactis, northeast structural genomics consortium target kr124f

• Total interactions analyzed: 15
• Total true interactions: 6
• Strongest Interaction:
  • Chains: D-E
  • Int. Res.: 62
  • Norm. En. per Res.: -2.7314
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	-17.1351	-99.244	-116.3791	51	12	3	4513	0	17	16
A-F	0.0	-12.9331	-74.1124	-87.0455	52	12	2	4590	0	16	16
B-C	0.0	-9.3133	-100.106	-109.4193	52	7	2	4694	0	19	18
C-D	-8.2359	-13.6683	-117.53	-139.4342	54	16	2	4944	0	16	17
D-E	-17.9748	-23.7253	-127.646	-169.346	62	13	2	5356	1	24	24
E-F	-7.238	-9.3892	-103.557	-120.1842	51	8	3	4603	0	14	15

Interface residues

• A-B: ALA105A, ALA111A, ALA116A, ALA133B, ALA152A, ALA75B, ARG110A, ARG132B, ARG143B, ARG151A, ASN113A, ASN74B, ASP147A, ASP66B, ASP77B, CYS137B, GLN109A, GLN136B, GLU117A, GLU140B, GLU141B, GLU158A, GLU69B, GLY142B, GLY156A, ILE135B, ILE139B, ILE76B, LEU112A, LEU138B, LEU157A, LEU70B, LYS114A, LYS121A, LYS146A, LYS155A, LYS72B, LYS73B, PHE148A, SER106A, SER107A, SER134B, THR104A, THR149A, THR150A, TRP67B, TYR108A, TYR63B, TYR71B, VAL153A, VAL154A
• A-F: ALA105F, ALA111F, ALA116F, ALA133A, ALA152F, ALA75A, ARG110F, ARG132A, ARG132F, ARG143A, ARG151F, ASN113F, ASN74A, ASP147F, ASP66A, ASP77A, CYS137A, GLN109F, GLN136A, GLU117F, GLU140A, GLU141A, GLU158F, GLU69A, GLY142A, GLY156F, HIS159F, ILE135A, ILE139A, ILE76A, LEU112F, LEU138A, LEU157F, LEU70A, LYS121F, LYS146F, LYS155F, LYS72A, LYS73A, PHE148F, PRO55A, SER106F, SER107F, SER134A, THR104F, THR150F, TRP67A, TYR108F, TYR63A, TYR71A, VAL153F, VAL154F
• B-C: ALA105B, ALA111B, ALA116B, ALA133C, ALA152B, ALA75C, ARG110B, ARG132C, ARG143C, ARG151B, ASN113B, ASN74C, ASP147B, ASP66C, CYS137C, GLN109B, GLN136C, GLU117B, GLU140C, GLU141C, GLU158B, GLU69C, GLY142C, GLY156B, HIS159B, HIS160B, ILE135C, ILE139C, ILE76C, LEU112B, LEU138C, LEU157B, LEU70C, LYS114B, LYS121B, LYS146B, LYS155B, LYS72C, LYS73C, PHE148B, PRO55C, SER106B, SER107B, SER134C, THR104B, THR150B, TRP67C, TYR108B, TYR63C, TYR71C, VAL153B, VAL154B
• C-D: ALA105C, ALA111C, ALA116C, ALA133D, ALA152C, ALA75D, ARG110C, ARG132C, ARG132D, ARG143D, ARG151C, ASN113C, ASN74D, ASP147C, ASP66D, ASP77D, CYS137D, GLN109C, GLN136D, GLN145C, GLU117C, GLU140D, GLU141D, GLU158C, GLU69D, GLY142D, GLY156C, ILE135D, ILE139D, ILE76D, LEU112C, LEU138D, LEU144D, LEU157C, LEU70D, LYS114C, LYS121C, LYS146C, LYS155C, LYS72D, LYS73D, PHE148C, SER106C, SER107C, SER134D, THR104C, THR149C, THR150C, TRP67D, TYR108C, TYR63D, TYR71D, VAL153C, VAL154C
• D-E: ALA105D, ALA111D, ALA116D, ALA133E, ALA152D, ALA75E, ARG110D, ARG130E, ARG132E, ARG143E, ARG151D, ASN113D, ASN74E, ASP147D, ASP66E, ASP77E, CYS137E, GLN109D, GLN136E, GLU117D, GLU140E, GLU141E, GLU158D, GLU69E, GLU78E, GLY142E, GLY156D, HIS160D, HIS161D, HIS162D, ILE135E, ILE139E, ILE76E, LEU112D, LEU138E, LEU144E, LEU157D, LEU70E, LYS114D, LYS121D, LYS146D, LYS155D, LYS72E, LYS73E, LYS82E, PHE148D, PRO55E, SER106D, SER107D, SER134E, THR104D, THR149D, THR150D, TRP67E, TYR108D, TYR63E, TYR71E, TYR81E, TYR84E, VAL131E, VAL153D, VAL154D
• E-F: ALA105E, ALA111E, ALA116E, ALA133F, ALA152E, ALA75F, ARG110E, ARG132F, ARG143F, ARG151E, ASN113E, ASN74F, ASP147E, ASP66F, ASP77F, CYS137F, GLN109E, GLN136F, GLU117E, GLU140F, GLU141F, GLU158E, GLU69F, GLY142F, GLY156E, ILE135F, ILE139F, ILE56F, ILE76F, LEU112E, LEU138F, LEU157E, LEU70F, LYS121E, LYS146E, LYS155E, LYS72F, LYS73F, PHE148E, SER106E, SER107E, SER134F, THR104E, THR149E, THR150E, TRP67F, TYR108E, TYR63F, TYR71F, VAL153E, VAL154E