3LYC
crystal structure of putative pectinase (yp_001304412.1) from parabacteroides distasonis atcc 8503 at 2.30 a resolution
Total interactions analyzed 120
Total true interactions 48
Strongest Interaction Chains J-L
Int. Res. 41
Norm. En. per Res. -4.0211
Hub Node F(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
Download
Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -12.1194 0.0 -298.16 -310.2794 115 24 7 9505 0 14 27
A-D -8.3867 0.0 -11.8011 -20.1878 22 1 0 684 0 15 8
A-E -11.416 18.92 -19.5463 -12.0422 43 1 0 1187 4 20 23
A-F 0.0 0.0 -0.9221 -0.9221 12 0 0 147 0 5 6
B-C 0.0 -4.9981 -7.2871 -12.2853 18 0 0 463 0 12 5
B-D -51.7896 9.8175 -84.1365 -126.1086 43 7 1 3549 2 30 29
B-E 0.0 0.0 -1.0779 -1.0779 11 0 0 156 0 4 5
B-H -11.8772 -0.9496 -21.0524 -33.8792 10 2 0 686 0 9 13
C-D -14.4594 0.9918 -272.709 -286.1766 114 28 7 9087 0 13 25
C-G -25.1 7.1072 -22.5432 -40.536 46 3 0 1371 3 23 29
C-H 0.0 0.0 -4.997 -4.997 13 0 0 342 0 7 6
D-F -8.9066 -0.6642 -15.0168 -24.5876 11 3 0 692 0 9 12
D-G 0.0 0.0 -3.8055 -3.8055 20 1 0 363 0 7 7
D-H 0.0 6.3149 -0.1016 6.2134 4 0 0 28 0 9 7
E-F -19.2102 2.3015 -300.749 -317.6577 115 17 6 9585 0 13 24
E-H 0.0 -17.5289 -30.2507 -47.7796 24 3 0 1336 0 13 9
E-I -36.256 -11.7599 -117.195 -165.2108 84 7 0 4380 8 65 84
E-J 0.0 9.5535 -17.2023 -7.6488 31 0 0 1052 0 35 27
F-G 0.0 -10.9515 -11.5125 -22.464 19 2 0 651 0 14 6
F-H -64.0767 13.6571 -84.2166 -134.6362 43 5 1 3464 1 30 31
F-I 0.0 6.5974 -18.2132 -11.6158 29 0 0 871 0 37 30
F-J 0.0 0.0 -0.0241 -0.0241 7 0 0 22 0 2 4
F-L 0.0 33.8211 -7.4285 26.3926 22 0 0 544 0 8 32
G-H -13.0805 3.2752 -283.017 -292.8223 117 29 6 9222 0 14 26
G-K -42.4801 -5.5131 -113.806 -161.7992 85 8 0 4543 8 69 91
G-L 0.0 -1.8165 -14.9784 -16.7949 28 1 0 817 1 36 28
H-J 0.0 31.4294 -9.6634 21.7659 25 0 0 659 0 8 34
H-K -9.573 -1.1586 -24.7829 -35.5145 31 3 0 1182 0 36 27
H-L 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 1 2
I-J -14.7351 1.3929 -285.48 -298.8222 112 20 6 9131 0 13 20
I-L -5.9106 0.0 -29.0496 -34.9602 22 3 0 987 0 13 8
I-M -9.3206 -9.2518 -43.9155 -62.4879 39 0 0 2068 4 19 22
I-N -7.2355 0.0 -5.5054 -12.7409 11 1 0 324 0 4 9
J-K -7.1185 -7.1239 -31.1184 -45.3608 22 8 0 1214 0 14 10
J-L -63.0166 -2.3092 -99.5384 -164.8642 41 8 1 3993 2 31 29
J-M 0.0 0.0 -2.5046 -2.5046 10 0 0 240 0 3 9
J-P -20.3217 0.0 -25.3978 -45.7195 15 1 0 1055 0 13 14
K-L -37.8188 1.7779 -278.303 -314.3438 107 35 7 8835 0 13 22
K-O -21.7134 -8.1824 -9.8407 -39.7365 46 9 0 1378 4 22 28
K-P 0.0 0.0 -7.3688 -7.3688 22 1 0 409 0 7 8
L-N -9.5906 -2.9099 -24.5169 -37.0174 14 0 0 819 0 13 13
L-O 0.0 0.0 -2.5605 -2.5605 19 3 0 357 0 7 8
L-P 0.0 0.0 -0.1136 -0.1136 7 0 0 32 0 14 10
M-N -22.4529 1.6668 -299.651 -320.4371 116 20 7 9647 0 15 26
M-P -4.3409 -4.6517 -32.4983 -41.4909 23 1 0 1249 0 13 7
N-O 0.0 0.0 -17.783 -17.783 19 0 0 761 0 15 11
N-P -59.7608 -1.8997 -75.8452 -137.5057 42 5 1 3289 1 28 30
O-P -15.8416 0.0 -270.332 -286.1736 103 34 8 8411 0 12 23