3LVG

crystal structure of a clathrin heavy chain and clathrin light chain complex

• Total interactions analyzed: 15
• Total true interactions: 9
• Strongest Interaction:
  • Chains: A-E
  • Int. Res.: 24
  • Norm. En. per Res.: -0.9812
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	42.1618	-30.502	11.6598	58	15	1	3347	0	30	31
A-C	-18.8901	21.85	-18.5626	-15.6027	43	19	1	2273	0	24	21
A-E	-4.3754	0.0	-19.1727	-23.5481	24	13	0	1574	0	0	0
A-F	-17.457	28.5023	-160.044	-148.9987	219	82	0	14467	0	60	73
B-C	-14.2328	41.9751	8.4015	36.1437	57	29	1	4046	0	36	30
B-D	-47.8331	39.9692	-145.884	-153.7479	325	133	0	22233	0	65	73
B-F	-12.1257	0.0	79.5535	67.4278	23	34	0	1569	0	0	0
C-D	-16.6834	0.0	114.75	98.0666	21	25	0	1019	0	0	0
C-E	-9.2042	-30.5309	-108.311	-148.0461	189	111	1	15168	2	50	63

Interface residues

• A-B: ALA1595A, ALA1615A, ARG1578B, ARG1588B, ARG1620B, ASP1575B, ASP1580B, ASP1611A, ASP1611B, ASP1614A, ASP1614B, GLN1601A, GLN1625A, GLU1584B, GLU1605A, GLU1617A, GLU1617B, GLU1622A, HIS1589B, ILE1591B, ILE1600A, ILE1600B, LEU1576B, LEU1577B, LEU1583B, LEU1607A, LEU1607B, LEU1613B, LEU1619A, LYS1604A, LYS1604B, LYS1609A, LYS1612A, LYS1621A, LYS1621B, MET1596A, MET1603A, MET1603B, PHE1594B, PHE1599A, PRO1579B, PRO1597A, SER1616A, SER1618A, THR1547B, THR1572B, THR1585B, THR1608A, THR1608B, TRP1587B, TYR1598A, TYR1606A, TYR1606B, VAL1581B, VAL1582B, VAL1602A, VAL1610A, VAL1610B
• A-C: ALA1595C, ALA1615C, ARG1578A, ARG1588A, ASP1580A, ASP1611C, ASP1614A, ASP1614C, GLN1601C, GLN1625C, GLU1584A, GLU1605C, GLU1617A, ILE1591A, ILE1600A, ILE1600C, LEU1576A, LEU1583A, LEU1607A, LEU1607C, LYS1604A, LYS1604C, LYS1609C, LYS1612C, LYS1621A, LYS1621C, MET1592C, MET1596C, MET1603A, MET1603C, PHE1594A, PHE1599C, PRO1579A, PRO1597C, SER1618C, THR1608C, TRP1587A, TYR1598C, TYR1606C, VAL1581A, VAL1582A, VAL1602C, VAL1610A
• A-E: ARG1588A, ASP1580A, GLU1584A, HIS1589A, ILE1591A, THR1585A, TRP1587A, UNK187E, UNK188E, UNK189E, UNK190E, UNK191E, UNK192E, UNK193E, UNK194E, UNK195E, UNK196E, UNK197E, UNK198E, UNK199E, UNK200E, UNK202E, UNK203E, VAL1581A
• A-F: ALA1081A, ALA1106A, ALA118F, ALA119F, ALA131F, ALA1355A, ALA1385A, ALA159F, ALA166F, ALA92F, ARG103F, ARG112F, ARG128F, ARG1293A, ARG141F, ARG1508A, ARG1509A, ARG154F, ARG1563A, ARG94F, ASN1078A, ASN1149A, ASN1380A, ASN149F, ASN152F, ASN153F, ASP1262A, ASP1292A, ASP134F, ASP1384A, ASP1476A, ASP1536A, ASP157F, ASP165F, ASP167F, ASP93F, CYS1565A, CYS1569A, CYS1573A, GLN1083A, GLN109F, GLN114F, GLN1291A, GLN1330A, GLN1354A, GLN142F, GLN1444A, GLN145F, GLN1478A, GLN1539A, GLN1601A, GLN162F, GLN163F, GLN97F, GLU100F, GLU1087A, GLU108F, GLU1123A, GLU1151A, GLU1152A, GLU115F, GLU124F, GLU126F, GLU1297A, GLU129F, GLU137F, GLU1413A, GLU144F, GLU1474A, GLU1475A, GLU147F, GLU1503A, GLU1506A, GLU1543A, GLU1605A, GLU98F, GLY1148A, GLY1294A, HIS1088A, HIS1356A, HIS1381A, ILE102F, ILE1086A, ILE1089A, ILE1505A, ILE1510A, ILE151F, ILE1600A, ILE168F, LEU1085A, LEU116F, LEU1323A, LEU1357A, LEU135F, LEU1412A, LEU1417A, LEU1419A, LEU1447A, LEU1504A, LEU1533A, LEU1570A, LYS104F, LYS111F, LYS1122A, LYS130F, LYS1326A, LYS1328A, LYS132F, LYS133F, LYS1415A, LYS1443A, LYS1449A, LYS148F, LYS150F, LYS1535A, LYS158F, LYS1609A, MET1120A, MET123F, MET1332A, MET1538A, MET1596A, MET1603A, PHE1258A, PHE1296A, PHE1327A, PHE1410A, PHE1414A, PHE1566A, PHE1599A, PRO1329A, PRO1382A, PRO1416A, PRO1446A, PRO1597A, PRO164F, SER101F, SER1080A, SER1127A, SER1147A, SER120F, SER1325A, SER1542A, THR1079A, THR1383A, THR1473A, THR1572A, THR96F, TRP105F, TRP1150A, TRP127F, TRP1358A, TRP138F, TYR1290A, TYR1295A, TYR1411A, TYR1477A, TYR1534A, TYR1574A, TYR1598A, TYR1606A, TYR161F, UNK10F, UNK11F, UNK12F, UNK13F, UNK14F, UNK15F, UNK16F, UNK170F, UNK171F, UNK172F, UNK173F, UNK174F, UNK175F, UNK176F, UNK177F, UNK178F, UNK179F, UNK17F, UNK180F, UNK181F, UNK182F, UNK183F, UNK184F, UNK185F, UNK187F, UNK188F, UNK189F, UNK18F, UNK190F, UNK191F, UNK192F, UNK194F, UNK195F, UNK196F, UNK197F, UNK198F, UNK199F, UNK19F, UNK200F, UNK201F, UNK202F, UNK203F, UNK20F, UNK21F, UNK2F, UNK3F, UNK4F, UNK5F, UNK6F, UNK7F, UNK8F, VAL1082A, VAL1084A, VAL1107A, VAL122F, VAL146F, VAL1602A
• B-C: ALA1595B, ALA1615B, ALA1615C, ARG1578C, ARG1588C, ARG1620B, ARG1620C, ASP1580C, ASP1611B, ASP1611C, ASP1614B, ASP1614C, GLN1601B, GLN1625B, GLN1625C, GLU1584C, GLU1605B, GLU1617B, GLU1617C, GLU1622B, GLU1623B, GLU1624C, HIS1589C, ILE1591C, ILE1600B, ILE1600C, LEU1576C, LEU1583C, LEU1607B, LEU1607C, LEU1613C, LEU1619B, LYS1604B, LYS1604C, LYS1609B, LYS1612B, LYS1621B, LYS1621C, MET1596B, MET1603B, MET1603C, PHE1594C, PHE1599B, PRO1579C, PRO1597B, SER1616B, SER1618B, SER1618C, THR1585C, THR1608B, TRP1587C, TYR1598B, TYR1606B, VAL1581C, VAL1582C, VAL1602B, VAL1610C
• B-D: ALA1081B, ALA1106B, ALA1124B, ALA1160B, ALA1164B, ALA118D, ALA119D, ALA1247B, ALA131D, ALA1355B, ALA1359B, ALA1385B, ALA159D, ALA166D, ALA92D, ARG103D, ARG112D, ARG1161B, ARG1165B, ARG1182B, ARG1204B, ARG1226B, ARG1251B, ARG128D, ARG1293B, ARG141D, ARG1481B, ARG1508B, ARG1509B, ARG154D, ARG1563B, ARG94D, ASN1078B, ASN1145B, ASN1149B, ASN1181B, ASN1223B, ASN1248B, ASN1288B, ASN1380B, ASN149D, ASN152D, ASN153D, ASP1126B, ASP1132B, ASP1133B, ASP1203B, ASP1207B, ASP1262B, ASP1281B, ASP1292B, ASP134D, ASP1384B, ASP1476B, ASP1536B, ASP157D, ASP165D, ASP167D, ASP93D, CYS1205B, CYS1565B, CYS1569B, CYS1573B, GLN1083B, GLN109D, GLN1110B, GLN114D, GLN1199B, GLN1200B, GLN1291B, GLN1330B, GLN1354B, GLN142D, GLN1444B, GLN145D, GLN1478B, GLN1539B, GLN1601B, GLN162D, GLN163D, GLN91D, GLN97D, GLU100D, GLU1087B, GLU108D, GLU1123B, GLU1151B, GLU1152B, GLU115D, GLU1166B, GLU1170B, GLU1172B, GLU1208B, GLU124D, GLU1255B, GLU126D, GLU1282B, GLU1284B, GLU1285B, GLU1297B, GLU129D, GLU1353B, GLU137D, GLU1413B, GLU144D, GLU1474B, GLU1475B, GLU147D, GLU1503B, GLU1506B, GLU1543B, GLU1605B, GLU98D, GLY1090B, GLY1148B, GLY1202B, GLY1294B, HIS1088B, HIS1356B, HIS1381B, ILE1086B, ILE1089B, ILE1505B, ILE1510B, ILE151D, ILE1600B, ILE168D, ILE169D, LEU1085B, LEU1153B, LEU116D, LEU1183B, LEU1283B, LEU1286B, LEU1323B, LEU1357B, LEU135D, LEU1412B, LEU1417B, LEU1419B, LEU1447B, LEU1504B, LEU1533B, LEU1570B, LEU95D, LYS104D, LYS1113B, LYS1118B, LYS111D, LYS1122B, LYS1162B, LYS1163B, LYS121D, LYS1254B, LYS130D, LYS1326B, LYS1328B, LYS132D, LYS133D, LYS1415B, LYS1443B, LYS1449B, LYS148D, LYS150D, LYS1535B, LYS158D, LYS1609B, MET1138B, MET123D, MET1332B, MET1538B, MET1603B, PHE1175B, PHE1258B, PHE1296B, PHE1327B, PHE1410B, PHE1414B, PHE1471B, PHE1566B, PHE1599B, PHE160D, PRO1105B, PRO1134B, PRO1329B, PRO1382B, PRO1416B, PRO1446B, PRO1597B, PRO164D, SER101D, SER1080B, SER1109B, SER1127B, SER1135B, SER1136B, SER1147B, SER1167B, SER120D, SER1249B, SER1325B, SER1542B, THR1079B, THR1146B, THR1230B, THR1250B, THR1252B, THR1383B, THR1473B, THR1572B, THR96D, TRP105D, TRP1150B, TRP127D, TRP1358B, TRP1386B, TRP138D, TYR1137B, TYR1168B, TYR1206B, TYR1289B, TYR1295B, TYR1411B, TYR1477B, TYR1534B, TYR1540B, TYR1574B, TYR1598B, TYR1606B, TYR161D, UNK12D, UNK14D, UNK15D, UNK16D, UNK172D, UNK173D, UNK174D, UNK175D, UNK176D, UNK177D, UNK178D, UNK179D, UNK17D, UNK180D, UNK181D, UNK182D, UNK183D, UNK184D, UNK185D, UNK186D, UNK189D, UNK18D, UNK190D, UNK191D, UNK192D, UNK194D, UNK195D, UNK196D, UNK197D, UNK198D, UNK199D, UNK19D, UNK1D, UNK200D, UNK201D, UNK202D, UNK203D, UNK204D, UNK205D, UNK20D, UNK21D, UNK22D, UNK23D, UNK28D, UNK2D, UNK32D, UNK38D, UNK39D, UNK3D, UNK40D, UNK41D, UNK42D, UNK43D, UNK44D, UNK45D, UNK47D, UNK48D, UNK49D, UNK4D, UNK50D, UNK51D, UNK52D, UNK53D, UNK54D, UNK55D, UNK56D, UNK57D, UNK58D, UNK5D, UNK60D, UNK61D, UNK62D, UNK63D, UNK64D, UNK65D, UNK66D, UNK67D, UNK68D, UNK69D, UNK6D, UNK71D, UNK72D, UNK7D, UNK8D, UNK9D, VAL1082B, VAL1084B, VAL1107B, VAL1154B, VAL1169B, VAL1201B, VAL122D, VAL1261B, VAL146D, VAL1602B
• B-F: ARG1588B, ASP1580B, GLU1584B, HIS1589B, THR1585B, TRP1587B, UNK187F, UNK188F, UNK189F, UNK190F, UNK191F, UNK192F, UNK193F, UNK194F, UNK195F, UNK196F, UNK197F, UNK198F, UNK199F, UNK200F, UNK202F, UNK203F, VAL1581B
• C-D: ARG1588C, ASP1580C, GLU1584C, HIS1589C, THR1585C, UNK190D, UNK191D, UNK192D, UNK193D, UNK194D, UNK195D, UNK196D, UNK197D, UNK198D, UNK199D, UNK200D, UNK201D, UNK202D, UNK204D, UNK205D, VAL1581C
• C-E: ALA118E, ALA119E, ALA131E, ALA1355C, ALA1359C, ALA1407C, ALA1435C, ALA1479C, ARG103E, ARG112E, ARG128E, ARG1293C, ARG1350C, ARG1406C, ARG141E, ARG1434C, ARG1509C, ARG1563C, ASN1380C, ASN1437C, ASN149E, ASN152E, ASN153E, ASP1292C, ASP134E, ASP1384C, ASP1431C, ASP1476C, ASP1536C, ASP1575C, ASP93E, CYS1565C, CYS1569C, CYS1573C, GLN114E, GLN125E, GLN1291C, GLN1354C, GLN1409C, GLN140E, GLN142E, GLN1444C, GLN145E, GLN1478C, GLN1539C, GLN1601C, GLU100E, GLU107E, GLU108E, GLU115E, GLU124E, GLU126E, GLU129E, GLU1353C, GLU137E, GLU1402C, GLU1413C, GLU144E, GLU1474C, GLU1475C, GLU147E, GLU1503C, GLU1506C, GLU1543C, GLU1564C, GLU1605C, HIS1356C, HIS1381C, HIS1432C, ILE1408C, ILE1472C, ILE1505C, ILE151E, LEU116E, LEU1323C, LEU1357C, LEU135E, LEU1412C, LEU1417C, LEU1419C, LEU1430C, LEU1447C, LEU1470C, LEU1504C, LEU1533C, LEU1570C, LEU95E, LYS104E, LYS111E, LYS130E, LYS1326C, LYS1328C, LYS132E, LYS133E, LYS1415C, LYS1441C, LYS1443C, LYS1449C, LYS148E, LYS150E, LYS1535C, LYS1562C, LYS1604C, LYS1609C, MET123E, MET1378C, MET1379C, MET1538C, MET1596C, MET1603C, PHE1327C, PHE1410C, PHE1414C, PHE1439C, PHE1471C, PHE1507C, PHE1566C, PHE1599C, PRO1329C, PRO1382C, PRO1416C, PRO1446C, PRO1597C, SER120E, SER143E, SER1542C, THR1383C, THR1433C, THR1473C, THR96E, TRP105E, TRP127E, TRP1358C, TRP138E, TYR1404C, TYR1405C, TYR1411C, TYR1438C, TYR1477C, TYR1534C, TYR1574C, TYR1598C, TYR1606C, UNK170E, UNK171E, UNK172E, UNK173E, UNK174E, UNK175E, UNK176E, UNK177E, UNK178E, UNK179E, UNK180E, UNK181E, UNK182E, UNK183E, UNK184E, UNK185E, UNK187E, UNK188E, UNK189E, UNK190E, UNK192E, UNK193E, UNK194E, UNK195E, UNK196E, UNK197E, UNK198E, UNK199E, UNK1E, UNK200E, UNK201E, UNK202E, UNK203E, UNK2E, UNK3E, UNK4E, UNK5E, UNK6E, UNK7E, UNK8E, VAL122E, VAL1401C, VAL1436C, VAL1442C, VAL146E, VAL1602C