3LDB

structure of jmjd6 complexd with alpha-ketoglutarate and fab fragment.

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 39
  • Norm. En. per Res.: -3.8632
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-4.9832	-4.4689	-112.46	-121.912	62	2	2	4737	0	10	6
A-C	-19.7757	-35.1227	-95.7669	-150.6653	39	6	0	3687	6	12	13
B-C	-2.5823	-14.1607	-491.307	-508.05	189	29	13	20004	0	13	12

Interface residues

• A-B: ALA289A, ALA324A, ARG62A, ARG65A, ASN100B, ASN37B, ASP158A, ASP159A, ASP76B, GLN162A, GLN27B, GLN318A, GLN333A, GLU319A, GLU322A, GLU57A, GLU58A, GLU61A, GLU64A, GLY33B, GLY72B, GLY74B, GLY97B, HIS320A, ILE2B, ILE34B, ILE98B, LEU160A, LEU29B, LEU316A, LEU323A, LEU326A, LEU38B, LYS154A, LYS35B, LYS36B, PHE155A, PHE294A, PHE59A, PRO295A, PRO321A, PRO66A, SER26B, SER28B, SER290A, SER291A, SER329A, SER32B, SER73B, SER99B, THR157A, THR292A, THR75B, TYR102B, TYR163A, TYR30B, TYR31B, TYR56B, TYR77B, VAL325A, VAL56A, VAL60A
• A-C: ALA51A, ARG62A, ARG65A, ARG71C, ARG98C, ASN53C, ASP50A, ASP58C, ASP99C, GLN53A, GLU57A, GLU58A, GLU61A, GLY101C, GLY55C, GLY56C, HIS33C, ILE51C, LEU52A, LEU54A, LYS154A, PHE59A, PRO66A, SER54C, SER55A, THR102C, THR30C, THR57C, TRP47C, TYR100C, TYR103C, TYR104C, TYR32C, TYR50C, TYR52C, TYR59C, TYR63A, VAL56A, VAL60A
• B-C: ALA106B, ALA130C, ALA136B, ALA40B, ALA57B, ALA96C, ARG162B, ARG38C, ARG97C, ARG98C, ASN100B, ASN141C, ASN143B, ASN144B, ASN37B, ASN60C, ASP106C, ASP163B, ASP171B, ASP173B, ASP176B, ASP1B, ASP58C, ASP99C, CYS140B, CYS147C, CYS94B, CYS95C, GLN110C, GLN130B, GLN167B, GLN39C, GLN43B, GLN48B, GLN91B, GLN95B, GLN96B, GLU129B, GLU46C, GLU6C, GLY101C, GLY105B, GLY107B, GLY109C, GLY111C, GLY132B, GLY134B, GLY146C, GLY164B, GLY169C, GLY33B, GLY42C, GLY47B, GLY49C, GLY63B, GLY90B, GLY97B, HIS171C, HIS178C, ILE123B, ILE217C, ILE34B, ILE37C, ILE54B, ILE98B, LEU129C, LEU131B, LEU138B, LEU145C, LEU148C, LEU166B, LEU177C, LEU181B, LEU181C, LEU184C, LEU185B, LEU187B, LEU215B, LEU38B, LEU39B, LEU44B, LEU45C, LEU4C, LEU52B, LEU53B, LEU63C, LYS109B, LYS150C, LYS175B, LYS213B, LYS215C, LYS216C, LYS36B, LYS43C, LYS44C, LYS45B, LYS51B, LYS64C, MET113C, MET48C, PHE104B, PHE105C, PHE124B, PHE141B, PHE145B, PHE173C, PHE61B, PHE93B, PRO101B, PRO125B, PRO126B, PRO128C, PRO131C, PRO174C, PRO219C, PRO46B, PRO50B, PRO61C, SER122B, SER125C, SER127B, SER128B, SER135B, SER168B, SER168C, SER175C, SER179C, SER180B, SER182B, SER183B, SER183C, SER185C, SER186B, SER186C, SER187C, SER32B, SER35C, SER49B, SER62C, SER99B, THR102C, THR103B, THR120B, THR133B, THR137B, THR142C, THR144C, THR170B, THR172C, THR178B, THR184B, THR189C, THR57C, THR59B, THR62B, THR92C, TRP108C, TRP161C, TRP195C, TRP36C, TRP41B, TRP47C, TYR102B, TYR103C, TYR104C, TYR107C, TYR127C, TYR179B, TYR31B, TYR42B, TYR50C, TYR52C, TYR55B, TYR56B, TYR59C, TYR92B, TYR94C, VAL121B, VAL126C, VAL139B, VAL142B, VAL143C, VAL149C, VAL165B, VAL169B, VAL170C, VAL176C, VAL188C, VAL218C