3LAW

structure of gtp-bound l129f mutant rab7

• Total interactions analyzed: 10
• Total true interactions: 5
• Strongest Interaction:
  • Chains: C-E
  • Int. Res.: 69
  • Norm. En. per Res.: -2.8009
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-7.2339	-13.4687	-114.229	-134.9316	69	6	3	4698	1	18	14
A-C	-20.0372	-28.8496	-112.307	-161.1938	70	13	3	4565	3	20	19
B-D	-23.2124	-36.2728	-133.361	-192.8463	70	10	3	5350	4	21	18
C-E	-29.6976	-15.7056	-147.86	-193.2632	69	8	3	5832	6	25	20
D-E	0.0	0.0	-3.0575	-3.0575	15	0	0	363	0	1	1

Interface residues

• A-B: ALA39A, ALA43B, ALA76B, ALA92A, ARG132A, ARG55B, ARG69A, ARG79B, ASN131A, ASN30B, ASN35A, ASN94A, ASP128A, ASP44B, ASP63B, ASP82B, ASP89A, GLN133A, GLN36A, GLN60B, GLN67A, GLU130A, GLU158A, GLU177B, GLU49B, GLY18A, GLY20A, GLY42B, GLY80B, ILE127A, ILE41B, ILE61B, LEU174B, LEU46B, LEU56B, LEU8B, LEU9B, LYS10B, LYS126A, LYS157A, LYS32B, LYS38A, LYS48B, LYS6B, LYS97A, MET59B, PHE129A, PHE33A, PHE45B, PHE70A, PHE77B, PRO93A, SER17A, SER34A, SER72B, THR178B, THR40B, THR47B, THR58B, THR91A, TRP62B, TYR37A, VAL180B, VAL19A, VAL29B, VAL57B, VAL75B, VAL7B, VAL90A
• A-C: ALA39C, ALA43A, ALA76A, ALA92C, ARG132C, ARG55A, ARG69C, ARG79A, ASN131C, ASN30A, ASN35C, ASN94C, ASP128C, ASP44A, ASP82A, ASP89C, CB5.42747-1.64098, CB6.02188-8.91902, CB9.10669-37.14214, CB9.508301.15255, GLN133C, GLN36C, GLN60A, GLN67C, GLU130C, GLU158C, GLU177A, GLU49A, GLY18C, GLY42A, GLY80A, ILE127C, ILE160C, ILE41A, LEU174A, LEU182A, LEU46A, LEU56A, LEU8A, LEU9A, LYS10A, LYS126C, LYS157C, LYS32A, LYS38C, LYS48A, LYS6A, LYS6A5, MET59A, PHE129C, PHE33C, PHE45A, PHE70A, PHE77A, PRO93C, SER155C, SER17C, SER34C, SER72A, THR47A, THR58A, THR91C, TRP62A, TYR37C, VAL180A, VAL19C, VAL29A, VAL57A, VAL7A, VAL90C
• B-D: ALA39B, ALA43D, ALA65D, ALA76D, ALA92B, ARG132B, ARG55D, ARG69B, ARG79D, ASN131B, ASN30D, ASN35B, ASN94B, ASP128B, ASP44D, ASP82D, ASP89B, GLN133B, GLN36B, GLN60D, GLN67B, GLU130B, GLU158B, GLU177D, GLU49D, GLY18B, GLY20B, GLY42D, GLY80D, ILE127B, ILE160B, ILE41D, LEU174D, LEU46D, LEU56D, LEU8D, LEU9D, LYS10D, LYS126B, LYS157B, LYS38B, LYS48D, LYS5D, LYS6D, LYS97B, MET59D, PHE129B, PHE33B, PHE45D, PHE70B, PHE70D, PHE77D, PRO93B, SER155B, SER17B, SER34B, SER72D, THR40D, THR47D, THR58D, THR91B, TRP62D, TYR37B, VAL180D, VAL19B, VAL29D, VAL57D, VAL75D, VAL7D, VAL90B
• C-E: ALA39E, ALA43C, ALA76C, ALA92E, ARG132E, ARG55C, ARG69E, ARG79C, ASN131E, ASN30C, ASN35E, ASN94E, ASP128E, ASP44C, ASP82C, ASP89E, GLN133E, GLN36E, GLN60C, GLN67E, GLU130E, GLU158E, GLU177C, GLU49C, GLY18E, GLY20E, GLY42C, GLY80C, ILE127E, ILE160E, ILE41C, LEU174C, LEU46C, LEU56C, LEU8C, LEU9C, LYS10C, LYS126E, LYS157E, LYS38E, LYS48C, LYS5C, LYS6C, LYS97E, MET59C, PHE129E, PHE33E, PHE45C, PHE70C, PHE70E, PHE77C, PRO93E, SER155E, SER17E, SER34E, SER72C, THR178C, THR47C, THR58C, THR91E, THR95E, TRP62C, TYR37E, VAL180C, VAL19E, VAL29C, VAL57C, VAL7C, VAL90E
• D-E: ARG79E, ASN35D, GLN109E, GLN36D, GLU105E, GLU158D, GLY74E, ILE108E, LEU73E, LYS157D, LYS31D, LYS32D, PHE33D, SER34D, SER72E