3KZI
crystal structure of monomeric form of cyanobacterial photosystem ii
Total interactions analyzed 171
Total true interactions 66
Strongest Interaction Chains C-T
Int. Res. 16
Norm. En. per Res. -4.9725
Hub Node A(13)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -17.1391 -17.5386 -107.986 -142.6637 56 3 3 5035 0 10 9
A-C -99.1743 -10.4482 -806.839 -916.4615 279 38 18 31981 5 29 31
A-D -223.7485 -57.8236 -1582.49 -1864.0621 416 94 46 63641 9 53 59
A-E -25.7128 5.3125 -60.5752 -80.9755 28 7 1 2379 0 5 6
A-F 0.0 -2.7338 -20.2097 -22.9435 15 2 0 736 0 1 3
A-I -25.2786 -37.6447 -248.459 -311.3823 83 19 6 9283 4 7 11
A-J 0.0 0.0 -32.1397 -32.1397 23 0 1 1256 0 0 0
A-L 0.0 3.6849 -41.5281 -37.8432 35 0 1 1732 0 1 1
A-M 0.0 0.0 -2.59 -2.59 9 0 0 120 0 0 0
A-O -55.0342 -53.9539 -167.95 -276.9381 81 26 2 7541 0 23 20
A-T -7.4603 0.0 -111.289 -118.7493 52 11 4 4605 0 2 2
A-U 0.0 0.0 -26.1422 -26.1422 10 2 0 687 0 2 1
A-V -31.0323 -6.1353 -122.69 -159.8576 60 4 3 5423 1 14 15
B-D -126.0404 -59.6992 -684.069 -869.8086 241 32 24 27519 11 34 34
B-H -121.4181 -44.3455 -490.398 -656.1616 159 67 9 20287 3 22 18
B-L -25.42 16.7447 -129.974 -138.6492 56 11 3 5203 0 6 7
B-M 0.0 3.9613 -8.8283 -4.867 27 0 0 698 0 2 1
B-O -39.6748 -65.2791 -202.326 -307.2799 80 24 2 7275 2 18 24
B-U -6.1232 -18.1828 -101.608 -125.914 49 7 1 4145 1 22 20
B-V 0.0 0.0 -0.0133 -0.0133 5 0 0 12 0 1 2
B-X 0.0 0.0 -0.0028 -0.0028 2 0 0 4 0 0 0
C-D -44.5229 -72.5644 -211.573 -328.6603 88 32 7 8024 6 12 16
C-I 0.0 -21.576 -75.5783 -97.1543 42 4 1 3260 1 11 13
C-J 0.0 0.0 -8.0696 -8.0696 16 0 0 441 0 0 0
C-K -19.7143 -3.3589 -195.293 -218.3662 84 16 11 8631 1 7 7
C-O -52.656 -57.4306 -361.041 -471.1276 107 24 1 13502 4 20 19
C-T -12.1042 -38.1399 -29.3158 -79.5599 16 8 0 1216 3 2 1
C-U -22.3461 -10.2521 -114.184 -146.7822 45 7 3 4541 1 6 9
C-V -24.7769 -50.8855 -208.519 -284.1814 98 22 4 9207 7 29 24
C-y 0.0 0.0 -4.0596 -4.0596 19 0 0 405 0 0 2
C-Z 0.0 9.1222 -98.5614 -89.4391 59 13 7 4122 0 2 2
D-E -10.8758 -53.2677 -342.885 -407.0285 106 21 11 14309 3 13 14
D-F 0.0 0.0 -100.047 -100.047 58 13 3 4299 0 2 3
D-H -5.6969 0.0 -53.9737 -59.6706 35 1 0 2294 0 1 1
D-J 0.0 0.0 -18.1515 -18.1515 18 0 0 595 0 0 0
D-K 0.0 0.0 -0.2866 -0.2866 3 0 0 26 0 0 1
D-L -7.0689 0.0 -89.0352 -96.1041 51 3 0 3154 0 0 0
D-M 0.0 7.5701 -33.4112 -25.8411 17 2 0 1321 0 1 4
D-O -38.9855 6.0484 -132.363 -165.3002 74 12 6 6585 3 34 33
D-T 0.0 0.0 -31.5623 -31.5623 33 3 3 1648 0 1 2
D-U -6.5136 0.0 -19.734 -26.2476 15 1 1 825 0 3 2
D-V -10.5288 5.1947 -32.0001 -37.3342 20 1 1 1375 0 3 3
D-X -15.6449 -28.0775 -127.312 -171.0344 55 10 2 5663 2 9 7
E-F 0.0 2.7965 -143.663 -140.8665 68 28 10 6773 0 3 4
E-H 0.0 0.0 -18.6971 -18.6971 10 1 0 657 0 1 0
E-J -13.726 -20.8062 -50.2463 -84.7785 36 20 2 3177 1 1 3
E-V -8.2342 7.6986 -42.5804 -43.116 29 5 3 1775 0 6 8
E-X 0.0 0.0 -0.0101 -0.0101 2 0 0 7 0 0 0
F-J -18.3863 0.0 -74.6113 -92.9976 33 9 4 3348 0 0 0
F-V 0.0 0.0 -3.6 -3.6 10 0 0 345 0 3 3
F-X 0.0 0.0 -0.0015 -0.0015 2 0 0 5 0 0 1
H-L 0.0 -1.2332 -0.3131 -1.5463 4 0 0 54 0 2 0
H-X 0.0 0.0 -60.4907 -60.4907 34 4 4 2781 0 2 0
I-O 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 0 0
J-K 0.0 0.0 -9.667 -9.667 24 5 1 1297 0 0 0
J-V 0.0 0.0 -12.5978 -12.5978 8 1 0 474 0 0 0
J-y 0.0 0.0 -14.8282 -14.8282 26 2 0 1044 0 0 0
K-y -8.3565 0.0 -71.258 -79.6145 47 7 7 4336 0 0 0
K-Z 0.0 0.0 -58.6403 -58.6403 36 3 3 2466 0 0 0
L-M -25.7009 -12.8635 -209.776 -248.3404 60 5 14 8397 0 2 1
L-T -4.7278 -10.7487 -148.483 -163.9595 52 3 11 5989 0 1 3
M-O 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 2 1
M-T 0.0 0.0 -24.5306 -24.5306 26 1 0 1409 0 1 2
O-U -10.5174 6.4008 -100.716 -104.8326 60 12 12 5057 0 20 10
U-V -26.1613 -12.826 -149.012 -187.9993 67 4 4 6380 1 13 9
y-Z -2.2265 0.0 -68.8905 -71.117 42 7 6 3809 0 2 1